Synechocystis sp. PCC 7338: HTZ78_08595
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Entry
HTZ78_08595 CDS
T10297
Name
(GenBank) DEAD/DEAH box helicase
Organism
synh Synechocystis sp. PCC 7338
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QUS60725
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Position
1822996..1826115
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AA seq
1039 aa
AA seq
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MATIHGNWQPSHGENGGKLFLWADTWGTTMPEATGDRHPFALDVPALVQAWSNVPLPFPP
LDKVTEQTLTLHLPSHRQQNIPLPFVTGQDPVAMDAKYLHWRSWQVTGVSLTPKQTLTLL
QSIPLGGQVLTSLGSEFYFYGQLHRWCLDLVLRGKFVPGLGQMGQDGSYYAQWIPILDSI
QDQTYLAQFTQRVPPCALALTPKTQAAQRIVVDLLQQLVQAQVEATSPTIGNAKEAWLNS
WLKGLTQPEQTSLGSGKALQRLATSLDHWYLPVQGYLGQQNNQALAQRQWRGALRLQPPV
DGAGGIWQLEYGLQALDDHKFWLPAASLWAMTGDRLVWQGRRVDQGAESLLRGLGVAAQI
YEPIADSLAQRCPTGCELDAIQAYEFILAIARQLRDRGLGVILPVGLERGGTAKRLGVKV
VGQVQRQKGQRLTLQSLINYDLQLMMGTGDNARRLTTADFEGLLAQKSPLVVLDGEWITL
QPADVRAAKAILQQQQSAPPLTVEDALRLSTGDLQTVSKLPVTQFAARGMLQELIDTLRN
PQGVEPIATPPGFQGTLRPYQARGVGWLAFLERWGLGACLADDMGLGKTPQLLAFLLHLA
AEDMLVKPVLIVCPTSVLSNWCHEINKFAPQLQTVLHHGDRRKKGQPLVKQVKDQQIVLT
SYALLQRDFSSLKLVDWQGVVLDEAQNIKNPQAKQSHAARQLPAGFRIALTGTPVENRLT
ELWSILEFLNPGFLGTQSFFQRRFANPIEKFGDRQSLLILRNLVRPFILRRLKTDQTIIQ
DLPEKQEMTVFCDLSQEQANLYQQLVEESLQAIADSKGIQRHGLVLTLLTKLKQVCNHPD
LLLKNPAITHGHHSGKLIRLAEMLEEMISEGDRALIFTQFASWGHLLKPYLEKYFNQEVL
YLHGGTPAAQRQALVERFQQDPNSPYLFILSLKAGGTGLNLTRANHVFHVDRWWNPAVEN
QATDRAFRIGQTRNVQVHKFVCTGTLEEKINAMMVDKQQLAEQTVDAGENWLTRLDTDKL
RQLLTLSATPVDYQAEASD
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcgactatccacggtaattggcaaccttcccacggggaaaacggcggcaaactgttt
ctttgggcggatacctggggtactaccatgccagaagccactggcgatcgccatcccttt
gcgttggacgtgccggccttggttcaagcttggtctaatgtgcccctgccttttccccca
ctggacaaggtcacggagcaaactttaacgctgcatttaccgagccatcgtcagcaaaac
atccccctgccctttgtgacagggcaagaccccgtggccatggatgcgaaatacctccac
tggcgatcgtggcaagttaccggggtgagtttgactcccaagcaaacgttgacgttgcta
caatccattcccctgggaggccaggtgctaaccagcttgggatcagaattttatttttac
ggtcaactgcaccgctggtgtttggatttagttctacggggcaaatttgtgccggggctg
ggacaaatggggcaagacggcagttactacgcccaatggattcccatcctcgatagcatc
caagaccaaacctatctggcccaatttacccagagagtccctccctgtgccctggccctg
acgcccaaaacccaagcggcccaaaggatagtggtggatttactccaacaattagtccaa
gcccaggtggaggccaccagtcccaccattggtaatgccaaagaagcttggttaaatagt
tggctcaagggcctgacccagccggagcaaacttccctgggtagcggtaaagctctgcaa
cgtttagccacatccttagaccactggtatctgccggtccagggttatctagggcaacaa
aacaatcaagccctagctcaacgacaatggcggggcgccctgcggttacagcccccagtg
gacggcgctggcggcatttggcagttggaatatggtttacaagccttggatgatcataaa
ttctggttaccggccgcttccctctgggccatgaccggcgatcgcctagtgtggcaggga
cggagagtggatcaaggggcagaaagtttactgcggggcttgggggtagcggcccaaatc
tatgaacccattgccgacagtttggcccaacggtgtcccacaggatgtgaactagatgcc
atccaagcctatgaatttatcctggcgattgcccgtcagttgcgagaccgggggttgggg
gtaatcctcccggtgggtttagaacggggcggcaccgctaaacggttgggggtcaaggta
gtagggcaagtgcaacgacaaaaaggccaacggctgaccctgcaaagcttaattaactac
gacctacagttgatgatgggcaccggggacaatgcccgacggttaaccactgcagacttt
gaaggtttgctggcccaaaaatctcctctggtggtgttagacggggaatggatcaccctg
caaccagcggacgtgcgggccgccaaggccattctccagcaacaacaatccgccccgccc
ctaacggtggaagacgccctacgcctcagcactggtgatttgcaaaccgtatctaagttg
ccagtgacccaatttgccgcccggggcatgttacaggagttgattgataccctccgcaat
ccccagggagtggagcccattgctaccccaccaggttttcagggcaccctgcggccctac
caagcccggggagtgggttggttagcctttttggaacgctggggtctgggagcctgtttg
gcagatgatatgggtctaggtaaaactccccaactactggcttttttgctccacttagcc
gctgaggacatgctggttaagccagtgctgatcgtttgtcccacatcggtgctgagtaat
tggtgccacgaaattaataagttcgctccccaactgcaaaccgtcttgcaccacggcgat
cgccggaaaaaagggcaaccgttggtcaaacaggtcaaagaccagcaaattgttctcacc
agttacgctttgttgcaacgggactttagcagtttgaaattggtggactggcagggggtg
gtgctggacgaagcccaaaatattaaaaatccccaggctaaacaatcccacgcggcccgg
caattgccagcgggttttcgcattgccttaacggggactccggtggaaaatcgactgacg
gaactctggtcaattttggaatttttaaatcccggtttcctgggcacccaaagctttttc
caacggcgctttgccaaccccatcgaaaaatttggcgatcgccagtccctgttaattttg
cgtaatttggtgcgaccgtttattttgcgacgcctgaaaacagaccaaactattatccaa
gacctgcccgaaaaacaggaaatgaccgttttctgtgacctctcccaagagcaggccaat
ttatatcaacaattggtggaggaatccctccaggcgatcgccgacagtaaaggcattcaa
cgccatggtttagttctcaccctattgaccaagctcaaacaggtctgtaaccatcccgat
ttattgctgaaaaatcccgccattacccatggacaccactccggcaaactcatccgtctg
gcggaaatgctcgaagaaatgatcagcgaaggcgatcgggcgttaatcttcacccagttt
gccagttggggccatctgctcaaaccctatctggaaaaatacttcaaccaagaggtcctc
tatctccacggaggcacccccgccgcccagcggcaagctctggtggaacgattccagcag
gatcccaatagcccctatttatttatcctttccctcaaggccggcggcacagggcttaac
ctcaccagggctaaccatgtgttccatgtggaccggtggtggaatccagcggtggaaaac
caagccacggatcgggcctttcgcattggccaaacccgcaacgtccaggtacacaaattt
gtttgcacgggcactttggaggaaaaaattaacgccatgatggtcgacaaacaacagttg
gcggaacagacagtggacgcaggggaaaactggcttacccgtttggacactgataagctc
cgtcagttattaactctatcggccaccccggtggattaccaagccgaagcgtccgattga
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