Synechocystis sp. PCC 7338: HTZ78_09475
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Entry
HTZ78_09475 CDS
T10297
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03086
RNA polymerase primary sigma factor
Organism
synh Synechocystis sp. PCC 7338
Brite
KEGG Orthology (KO) [BR:
synh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HTZ78_09475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synh03021
]
HTZ78_09475
Transcription machinery [BR:
synh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HTZ78_09475
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QUS60875
LinkDB
All DBs
Position
complement(2019966..2021075)
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AA seq
369 aa
AA seq
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MSDMSSLSTPNTSAVDQVEALHNLVDGQAIANDDSPAIEVTLAAGQQGSFNKAVSEDTVG
AFFKEMARYPLLSATEEVELARQIRLLVNAEDIRQQLTQQLERTPSLQEWGQALEFTQVR
QFEIWLYQLRAAKRRMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRAAEKFDPDK
GYKFSTYAYWWIRQAITRTIANDARTIRLPIHVVEKLNKIKKAQRSLKQELKRNPNEGEL
AAALEITPTQLRQLLQLRRQSLSLNHRVGKGEDTELVDLLEDQQLQLPEDLMNESMLRRE
IVEVLAEVLTEREMEVICLRYGIASHQSYTLEEVGNMFNLSRERVRQIQSKAMRKLRRPQ
VARRLKGWL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgtcttccctttccacccccaacaccagtgccgttgaccaagttgaagct
ttgcataatctcgttgatggccaggcgatcgccaacgatgattcccccgccattgaggtc
accttagcggcaggccagcaagggagttttaataaggcagtcagtgaagacaccgtgggg
gcttttttcaaagaaatggcccgctatcccctcctcagtgccaccgaagaagtggaattg
gccagacagatccgacttttggtcaacgcagaagacattagacaacaacttacccaacaa
ttggagcgaacgccttccctccaggagtggggccaggccctggaatttacccaggtcaga
cagtttgaaatttggctctaccaactgcgggccgccaaacggcgcatgatccgctccaat
ctccgcttagtggtctccattgccaagcgttatctcaaccggggtgtccccttcctcgac
ctgatccaagaaggggcgatcggtctgaaccgagccgcagaaaagtttgatcccgataaa
ggttataaattttccacttatgcctactggtggatccgccaggccatcacccgcaccatt
gccaatgatgcccgcaccattcgcttgcccatccatgtggtggaaaagctcaacaaaatc
aagaaagctcaacgtagtctcaagcaagaattgaagcgcaatcccaacgaaggggaattg
gccgccgctctggagattacccccacccaactaaggcaactactgcaactacgtcgtcaa
tccctgtccctcaaccaccgggtgggcaaaggagaggatacagagttggtagatttgttg
gaagatcaacaactgcagttgcccgaggatttgatgaatgagtctatgctgcggcgggaa
attgtcgaagtattggcagaagtactaacggaacgggaaatggaagtgatttgtttgcgt
tacggcatcgctagccaccaaagctacaccctagaggaagtgggcaatatgtttaatctt
tcccgggaaagggtgagacaaatccagagcaaagccatgcgaaaactccgccgtccccag
gtggctcgtcgcctcaaaggttggttatag
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