Synechocystis sp. PCC 7338: HTZ78_12205
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Entry
HTZ78_12205 CDS
T10297
Symbol
rpoC1
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
synh Synechocystis sp. PCC 7338
Pathway
synh03020
RNA polymerase
Brite
Enzymes [BR:
synh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HTZ78_12205 (rpoC1)
Transcription machinery [BR:
synh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HTZ78_12205 (rpoC1)
DNA repair and recombination proteins [BR:
synh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HTZ78_12205 (rpoC1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QUS61348
LinkDB
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Position
complement(2604783..2606663)
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AA seq
626 aa
AA seq
DB search
MKAQSEPRFDYVKIAIASPERIRQWGERTLPNGTVVGEVTKPETINYRTLKPEMDGLFCE
KIFGPSKDWECWCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVTHVWYLKG
IPSYLSILLDMALRDVEQIVYFNAYVVLNPGNASNLQYKQLLTEDQWVEIEDQIYAEDSE
LEGIEVGIGAEAVQRLLAELQLEEVAEKLREEILASKGQKRAKLIKRLRVIDNFIATHSQ
AEWMTLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPNLKIYQCGLPREMAIELFQPFVIHRLIKLGIVNNIKAAKKLILKGDPQIWSVLE
EVITGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LEAQCEARLLMLACHNVLSPATGKPIVAPSQDMVLGCYYLTAENPNAQKGAGRYFAGIED
ALRAYDHGQVDLHAQIWIRHLDEEVVTEKPDMEVLKTEELGDGTVMKYYRERKVREAADG
EIITQYIQTTAGRIIYNKTIAEALVF
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccaatcagaacctcggtttgattacgtcaaaattgcgatcgcctcccccgaa
aggatccgtcagtggggagaacgcaccctaccgaatggcaccgtagtgggggaagtgacc
aaacccgaaaccattaactaccggaccttaaaaccggaaatggacggtctgttctgtgaa
aaaatcttcggcccttccaaagattgggaatgctggtgcggcaaatataaacgggtacgg
caccggggcattgtctgtgaacgctgtggcgtagaagtaacggaatcccgggtccggcgt
caccgcatgggctatatcaaattggccgcccctgtcacccacgtgtggtatctcaaaggc
atccccagctatctcagtattctgttggatatggccctgcgggatgtggagcaaattgtt
tatttcaacgcctatgtggtgctcaaccccggtaatgccagcaatctgcagtataaacaa
ctgttgacagaagaccagtgggtggaaatcgaagaccagatttatgccgaagattcggaa
ctagaaggcatcgaagtgggcattggtgccgaggcagtgcaacggctattggcggagtta
caactagaggaagtggcagaaaagctacgggaagaaattctagctagtaaagggcaaaag
cgggccaagcttattaaacgtctgcgggtaattgataatttcatcgcgacccactcccaa
gcggaatggatgaccctggatgtgattcctgttattcccccggatctacgccccatggtg
cagttggatgggggtcggtttgccacctctgacttaaacgatctttatcggcgggtaatc
aaccgtaataaccgtctggcccgtttgcaggaaatcctcgccccggaaattattgtccgt
aacgaaaaacggatgctccaggaagcagtggatgccctcattgataacggccgccggggt
cgcacggtggtaggggccaataatcgagcccttaaatctctctccgatattatcgaaggt
aagcagggtcgtttccgtcagaacctcctgggtaaaagggtcgactactccggtcgttcc
gtcatcgtggtgggtcccaacctcaaaatttatcaatgtggcctaccccgggaaatggcg
atcgaactcttccagccctttgtgattcaccgtttgatcaaactaggtattgtcaacaac
atcaaggcagccaagaagttaattctcaagggagatccccaaatttggagcgtgctggaa
gaagtaattaccggccaccccgtcatgctcaaccgggctcccaccctacaccgtttgggt
attcaggcctttgaaccaattttggtggaggggcgagccatccaactccatcccctagta
tgtcccgcttttaacgctgacttcgacggtgaccaaatggcggtacacgtgcccttgtct
ctggaagcccaatgtgaagcccggctattaatgctggcctgccacaacgttctttcccct
gccactggtaagcctattgtggcgccatcccaggacatggtactgggctgttattacctc
acagcggaaaatcccaacgcccagaagggagcaggacgttactttgccggtattgaagac
gctctacgggcctacgaccatggccaggtggatctccacgcccaaatttggattcgtcac
ctggatgaagaggtggtgacggaaaaaccagatatggaagttctcaaaaccgaggaattg
ggagatggcacggtgatgaaatattaccgggaaaggaaagtacgggaagcagcggacggg
gaaattatcacccagtacattcaaacgactgcggggcgaatcatttacaacaaaacgatc
gccgaggcgttggtcttctaa
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