Synechococcus sp. KORDI-100: KR100_00840
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Entry
KR100_00840 CDS
T03344
Name
(GenBank) topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
synk
Synechococcus sp. KORDI-100
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synk03032
]
KR100_00840
03400 DNA repair and recombination proteins [BR:
synk03400
]
KR100_00840
Enzymes [BR:
synk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KR100_00840
DNA replication proteins [BR:
synk03032
]
Prokaryotic type
DNA Topoisomerases
KR100_00840
DNA repair and recombination proteins [BR:
synk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KR100_00840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TR61B_FKBP-like
Niban2
Motif
Other DBs
NCBI-ProteinID:
AII41952
LinkDB
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Position
complement(155927..158404)
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AA seq
825 aa
AA seq
DB search
MAEERVQPIALHQEMQRSYLEYAMSVIVGRALPDARDGLKPVQRRILYAMQELGLTPDRP
YRKCARVVGDVLGKYHPHGDQAVYDALVRLVQTFSSRHPLLDGHGNFGSVDDDPPAAMRY
TETRLAPIAHQALLEEIGDDTVDFAPNFDGSQQEPTVLPAQLPFLLLNGCSGIAVGMATS
IPPHNLGEVVDGLIALIRKPALSDERLLELIPGPDFPTGGEVLLSSGLRDTYLRGRGSIP
MRGVAHIEEVQPGKGRHKRNAVVITELPYQLSKAGWIEKLAELVNDGKIGGIADIRDESD
REGMRVVVELRRDGNPEKVLADLQRRTALQSNFGAILLALVNGQPQQLSLRQLLQTFLDY
RELTLIRRTSYALRKTEDRLEVVSGLITALNNLQDVISMIQEAADAASARASLMVRLDLS
ERQADAVLAMPLRRLTGLEQESLRKELEDLRQERERLKLLLENRDQLLDALVNELKGLKK
RFATARRTRLVEGGDELMAERAASQRPNTELLRQQALAALPADARLLIQADGQVKVISPQ
VLGRLHLNEASPLGDEPSPARLILPIEPPPRLLAISAGGRVATVRWEFAGQQPGMLERFL
PTGLEGDPVIGIEPLPQGDCSELSLGLLSSDGRFKRLPLSEVLDLSGRATSVVKLKDGIS
LRAAVICRNASDLALVSDIGRVIKLPVQEDCLPLMGRLAQGPMTMRLFPGEQLAGAVSLM
STQTILVATVQGRISRIDASQLRRCQRGDLGEVAVQLEGKNDKVQAICSGAGLIGLITSQ
KRHGRLDANDYPCCKPGETSSTQLVLGSGETLTHLVPLVQDKTVS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcgcgtccaaccgatcgccctgcatcaggagatgcagcgctcctacctc
gagtacgccatgagcgtgatcgtgggtcgggcacttccggatgcccgcgatgggttgaaa
cctgttcaacgcaggatcctgtatgcaatgcaggagctcggactcacacccgatcgcccc
taccgcaagtgcgcccgcgtcgtcggtgatgttctgggcaagtaccacccccatggcgat
caggctgtctacgacgcactggtgcggttggttcagaccttctccagccgtcaccctctg
ctggatggacacggcaacttcggctcggtcgacgacgatccgccggccgccatgcgatac
accgaaacgcgtctggctccaatcgcccatcaggcacttctcgaagaaatcggcgacgac
accgttgatttcgcaccgaactttgatggttcccaacaggaacccacggtgctgccggcg
cagcttcccttcctgctgctcaacggatgttcaggcatcgccgttggcatggccaccagc
atcccccctcacaatctcggtgaggtggtggatgggctgatcgccctgattcgcaagccc
gcgctcagcgacgagcggctgcttgagctgatcccgggacctgattttccgactggagga
gaggtcctgctgagcagtggccttcgggatacctacctgcgcggccgcggcagcatcccg
atgcggggtgtggctcacatcgaggaagtgcaacccggcaagggacgccataagcgcaac
gctgtggtgatcacggaactcccataccaattgagcaaggccggttggattgaaaaactg
gccgaactcgtcaacgacggaaaaatcggcggcatcgcagacatccgcgacgaaagcgac
cgcgaagggatgcgcgtggtggtggaactgcgcagagacggaaacccggaaaaagtgctc
gcagacctgcaacgacgcacggccctgcagagcaacttcggagccatcctcctggctctc
gtcaatggccaaccccagcagctctccctgcgccagctgcttcagacgtttctcgattac
cgggaactgaccctgatccgacgcaccagctacgcgctgcgcaagacggaagaccgactc
gaagtggtatctggcctgatcaccgcgctgaacaacctgcaggacgtgatcagcatgatc
caggaggcagccgatgctgcgtcagctagagccagcctgatggtgcgtctggatctgtcg
gaacgtcaggctgatgctgtgctggcgatgcctttgcgacgtctcaccggactggagcag
gagagccttcgcaaggaactggaggatctgcgtcaggaacgggagcgcctgaaactgctt
ctggagaacagggatcagcttctcgatgcgctcgtgaatgagctgaagggactgaagaaa
cgctttgcgacagcgagacgcacacggctggtggaagggggcgatgaattgatggcggaa
cgggccgccagccagcgacccaatacggaactgctgaggcaacaggccctcgcagcgctg
ccggcggatgctcgtctcctgattcaggccgatggtcaggtgaaggtgatctctccccag
gtccttggccgtctccacctcaacgaagcgagccctcttggtgatgagccttcgccggcg
agactgatcctgccgatcgaaccccctccgcggttgctggcgatcagcgctggcggccgc
gttgcaaccgtgcgctgggaatttgccggtcaacaaccgggcatgctcgaacgtttcctg
ccgactggtcttgagggagatcctgtgatcggaatcgaacctctgcctcagggagactgc
tccgaactcagtctcggtctgctgagcagcgacggacgattcaaacggcttcccctcagc
gaagtcctggatctctccggacgggccaccagtgtggtgaagctcaaggacggaatcagt
ctgcgcgccgccgtgatctgccgaaacgcttcggatctagctcttgtgagcgacatcggc
cgggtcatcaaacttccggttcaggaggactgtttaccgctgatgggacgcctggctcag
ggacccatgacgatgcggctgttccccggagagcagttggcgggtgcagtcagtctgatg
tcgacccagacaatccttgtggccacggttcaaggtcgaatcagtcgcatcgatgcttct
cagctgcgacgctgccagcggggagacctcggcgaggttgccgtgcaactggagggaaag
aacgacaaggttcaggccatctgcagcggagctggtctgatcgggctgatcaccagccag
aaacgccacgggcgattggatgcgaacgactatccatgctgcaaaccgggtgaaaccagt
tcgacacagctggttcttgggtccggtgaaaccctcacccacctggttccccttgtgcag
gacaagacagttagctga
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