Synechococcus sp. KORDI-100: KR100_01070
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Entry
KR100_01070 CDS
T03344
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk00550
Peptidoglycan biosynthesis
synk01100
Metabolic pathways
synk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KR100_01070
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KR100_01070
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
synk01011
]
KR100_01070
Enzymes [BR:
synk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KR100_01070
Peptidoglycan biosynthesis and degradation proteins [BR:
synk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KR100_01070
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
CT_A_B
Motif
Other DBs
NCBI-ProteinID:
AII41997
UniProt:
A0A076GZH4
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All DBs
Position
196725..198530
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AA seq
601 aa
AA seq
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MSISGSQGRAIQRQTGLQQQPLVLLLVILLFCGAMAARLVWMQLLEHNRFRELADENRIR
LVPRSPIRGRLLDRKGRVLASSKLSYTLYVEPRLVSDQDWPALRDRLASLLNLKPEQLDA
RRGRGLDRDGYRITLALDLKPEQVLRFREQSASLQGAQVDVDILRYYPNGTLAAHAIGYT
SPVTDEEFKTLAEKGYKIRDRIGRIGVEAAYESQLRGQWGGQMLEVNAMGEVQRNLGDRP
SVAGKDLTLTIDLDLQRVAEQVLADKPGGAIVVLDPSDGGILALASKPTFDPNFFSKLIT
TQKEYDALFKSPKKPLFSRAMNAYDPGSTWKPVTAMAGMESGKFPPETKLHTTACITYGG
HCFPDHNGAGFGHIGYADALRFSSNTFFYQVGVGVGSMELKKAATQLGFMQKTGIEIGWE
ESIGLVGDEQWAAEGRGGWAKPGSMPWIPEDMASASIGQSVVQITPLQLARSYAVFANGG
WLVTPHFAKSDKDWRLPPYKTKVSIKPSTLQTIREGLRKVVSSGTGAGLNGPGIPPAAGK
TGTAEDSTGGPDHAWFGCYAPYPNGEIVVVAFAQNTPGGGSVHALPMAKKVLAEWEKGRR
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctccggttctcagggccgtgctatccagcggcagaccggcctgcagcagcaa
ccgctcgtgctgctgctggtgattcttctgttctgcggcgccatggccgcgcggctggtc
tggatgcagcttctggagcacaaccgcttccgcgagctcgctgacgagaaccgaattcgc
ctggttccccgttcgccgatccgtggtcgcttgctggaccgcaaggggcgggttctcgct
tccagcaagctgtcctacaccctgtatgtcgaaccgcgtctggtcagcgatcaggactgg
ccagccttgcgtgatcgtctggcatccctgctcaacctcaaacctgagcaacttgatgcc
cgccgcggccgtggcctggatcgtgacggctatcgcatcaccctggcgctcgatctcaag
cccgagcaggtcctgcgtttccgggagcagtctgcatcgctgcagggtgcccaggttgat
gtcgacattcttcgctactaccccaacggcaccctggcggcccatgccattggctacacc
tcgccggtcaccgatgaagagttcaagaccctggctgagaagggctacaagatccgcgat
cgaatcggacgcatcggggtcgaagcggcctacgagagtcaactgcggggccagtggggc
ggccagatgctcgaggtgaatgccatgggagaggtgcagcgaaacctcggtgatcgacca
tcggtggccggcaaggacctgacactgacgatcgatctcgatctgcagcgggtggccgag
caggttctggcggataaaccgggcggggcgatcgtggttctcgatcccagcgacggcggc
atcctggcgctcgccagcaaaccgacgttcgatcccaacttcttctccaagctgatcacc
acgcagaaggaatacgacgctctcttcaaatcgcccaagaagccgctattcagcagggcg
atgaacgcgtacgacccaggcagcacctggaagccggtcacggcgatggcgggcatggag
tccggcaaattcccgccggagacgaagttgcacaccacggcctgcatcacctacggcggc
cattgtttcccggatcacaacggtgccggtttcgggcatatcggctatgccgatgccctg
cgcttctccagcaacacgttcttctatcaggtgggcgttggggtgggatccatggagctg
aagaaggcggcgacccagctcggcttcatgcagaagaccggcattgagatcggctgggag
gagagcatcggtctggtcggcgatgagcaatgggcggccgaaggccgcggcggctgggca
aagcccggatccatgccctggattcccgaggacatggccagtgcctcgatcggacaatcc
gtcgttcagatcacgccattgcagttggcacgctcctacgcggtgtttgccaacggcggc
tggctggtgacaccgcacttcgccaagtcagacaaggactggcgattgccgccttacaaa
accaaggtctccatcaagccatccaccttgcagaccattcgagagggtctgcgcaaagtc
gtctccagcgggacgggtgcaggactcaacggccctggaattccgcctgctgccgggaag
accggcaccgctgaggacagcacgggtggaccggatcatgcctggttcggttgttatgcc
ccctatcccaacggggagatcgtggtggtcgctttcgcccagaacactccgggtggaggg
tccgttcatgcgcttccgatggcgaaaaaagttctggcggagtgggagaagggccgcagg
cgctga
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