Synechococcus sp. KORDI-100: KR100_01125
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Entry
KR100_01125 CDS
T03344
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk03030
DNA replication
synk03430
Mismatch repair
synk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KR100_01125
03430 Mismatch repair
KR100_01125
03440 Homologous recombination
KR100_01125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synk03032
]
KR100_01125
03400 DNA repair and recombination proteins [BR:
synk03400
]
KR100_01125
Enzymes [BR:
synk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KR100_01125
DNA replication proteins [BR:
synk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KR100_01125
DNA repair and recombination proteins [BR:
synk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KR100_01125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_30
DnaA_N-like_STI
RuvB_N
AAA_16
AAA_19
AAA_11
BipA_C
TsaE
AAA_18
TatA_B_E
Motif
Other DBs
NCBI-ProteinID:
AII42008
LinkDB
All DBs
Position
complement(207104..208930)
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AA seq
608 aa
AA seq
DB search
MSTAYQPLHHKYRPQRFDQLVGQEAIAATLGHALTSNRIAPAYLFSGPRGTGKTSSARIL
ARSLNCLNSDVPTPEPCGQCELCTTIASGTALDVIEIDAASNTGVDNIRELIERSRFAPV
QARWKVYVVDECHMLSTAAFNALLKTLEEPPPQVVFVLATTDPQRVLPTILSRCQRFDFR
RIPLEALEQHLSWIAEQEAIEIQPEAIHVVAQRSQGGLRDAESLLDQLSLLPAPIEATAV
WDLLGAVPEQELLELVNAMSSSEPVELLEAARNLLDRGRDPGAVLQGLAGILRDLVLMAA
APDRTDLTSVSPQFRDQLPDLARAIGRTKLLHWQAQLRGTEQQLRQSVQPRLWLEVLLLG
LLAEPTSTAAPSTTAAPRPSQAIAPPAARPATTPADPSPPPPVQKEAVAPPQVAKEPAAA
SPQLPNLSASEVNLPELWQQILGSLELPSTRMLLSQQGQLVRLDANRAVVQVAGNWMGMV
QSRTALLEQAIAKALGGSRQLILESQSNAMPPAPVVTSPVVTPQAPQTQQPDALKPPSAQ
KVVNPAPVQPVEQQSSAPVSQPQGPAKRQVPQAPQTTQSGAPATGIEKQAKNLADFFNGQ
VLDVNLDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagtacggcctaccagccgctgcatcacaaataccgcccccagcgcttcgaccagctg
gtggggcaagaagcgattgccgccacccttggccatgccctgaccagcaaccggatcgca
ccggcctatctgttcagtggtccgcggggcaccggcaagacatccagcgccaggatcctg
gcccgatcgctcaactgcctgaacagcgacgtgccgacgccggaaccctgtggccaatgc
gagttgtgcacaacgattgcgagcggaacagctctggatgtgatcgagatcgacgccgcc
tccaacaccggtgtcgacaacatccgggaactgatcgaacgctcccgcttcgcgccggtg
caggcgcgctggaaggtgtacgtggtggacgagtgccacatgctttcaacggctgccttc
aacgccctgttgaaaaccctggaggagcccccaccacaggtggtgttcgtgctcgccacc
acggatccccagcgggtgctgcccaccatcctcagccgctgtcagcgcttcgatttccgc
cgcattcccctcgaggctctcgaacaacacctgagctggatcgccgaacaggaagccatt
gagatccaacctgaggccattcatgtggtggcccagcgctcccaggggggcttgcgcgat
gccgaaagcctgctggaccagctcagcctgctgccggctccgatcgaagcgaccgctgtc
tgggatctcctgggggccgtgccagagcaggaactgctggaactggtgaacgcgatgagc
agttcagagccggtggagctgctggaggcagcccgcaacctgctggatcgcggccgcgat
cccggcgccgtgctgcaggggctggccggcatcctgagagatctggtgctgatggcggcc
gcaccggaccgaacggacctcaccagcgtctcgccccagttccgcgaccagctgccagat
ctcgccagagccatcggccgcacgaaactgctgcactggcaggcccaactgaggggaacc
gaacagcaactgcgccagagcgttcagccgcgcctctggctggaagtgctgcttttgggc
ctgctcgcggaacccaccagcaccgcagcaccatcaacaaccgcagctccccgtccaagc
caagcaatcgcccccccagccgcccgtccagccacgactccggccgacccctcgcctcca
cccccagttcagaaggaagcagttgctcctcctcaagtcgcaaaagagcctgcggcagcc
tcaccacaactgcccaatctttcagcaagcgaggtcaatcttcccgagctctggcagcag
atcctgggaagcctggaattgccttcaacgcgaatgctgctgtcccagcagggccagctg
gttcgcctggatgcaaatcgcgcggtggttcaagtggccggtaactggatgggaatggtg
caaagccggaccgccttgctggagcaggccatcgccaaagcactgggtggctcacgccag
ctcattctcgaatcccagagcaatgccatgccccctgcccctgtggtgacgtcaccggtt
gtgactccgcaagcaccacaaacccaacagcccgatgctctgaaaccaccttctgctcag
aaggtcgtaaaccccgcgccagtgcagccagttgaacagcaatcgtcggcgcctgtgtca
cagcctcaaggtccagcaaagcgtcaagtgccacaagcaccacagacgacacagtccgga
gcgccagcaaccgggatcgaaaagcaggccaagaacctggctgatttcttcaatggtcag
gttcttgacgtgaacttggatgagtag
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