Synechococcus sp. KORDI-100: KR100_01625
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Entry
KR100_01625 CDS
T03344
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
synk
Synechococcus sp. KORDI-100
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synk03032
]
KR100_01625 (gyrB)
03400 DNA repair and recombination proteins [BR:
synk03400
]
KR100_01625 (gyrB)
Enzymes [BR:
synk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KR100_01625 (gyrB)
DNA replication proteins [BR:
synk03032
]
Prokaryotic type
DNA Topoisomerases
KR100_01625 (gyrB)
DNA repair and recombination proteins [BR:
synk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KR100_01625 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
DUF6507
Motif
Other DBs
NCBI-ProteinID:
AII42107
LinkDB
All DBs
Position
323552..325519
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AA seq
655 aa
AA seq
DB search
MSDASKVQNAYGAEQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGH
CDGILVVLGEDGSASISDNGRGIPTDVHPRTGKSALETVLTVLHAGGKFGAGGYKVSGGL
HGVGVSVVNALSEWVEVTVRRQGQVHRQRFERGAPIGTLRSEPLPAGQDDQTGTSVCFKP
DAEIFTVGIVFDYATLAARLRELAYLNGGVRIVFRDERESSRTADGEAHEEIYFYEGGIK
EYVAYMNAEKDALHPDIIYVNSEKDGVQVEAALQWCSDAYSDSILGFANNIRTVDGGTHI
EGLKTVLTRTLNAFAKKLGKRKESDSNLAGENIREGLTAVLSVKVPEPEFEGQTKTKLGN
TEVRGIVDNLVGEALGQFLEFNPSVIGLILEKAIQAFNAAEAARRARELVRRKSVLESST
LPGKLSDCSSRDPSESEIYIVEGDSAGGSAKQGRDRRFQAILPLRGKILNIEKTDDAKIY
KNTEIQALITALGLGIKGEDFDEKNLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQKDLV
EGGYIYIACPPLYKVERGKNHTYCYNEADLQKTLDGFGEKANYTIQRFKGLGEMMPKQLW
ETTMDPTTRMMKRVEIEDALEADRIFTILMGDKVAPRREFIETHSAELDMAALDI
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcttccaaggttcagaacgcctacggcgctgagcagatccaggtgctggag
ggtcttgaacccgtccgcaagcgcccgggcatgtacatcggctcgacggggccccgcggt
ttgcatcacctcgtctatgaggtggtggacaattcggttgatgaagccttagccggtcac
tgcgacggaattctcgttgtcttgggtgaggacggctccgcgtccatcagcgataacggt
cgcgggattccaacggacgtgcatccccgcaccggcaagagtgcgcttgagacggtgctc
acggtgctgcatgccggaggcaagttcggcgccggtggctacaaggtgtccggcggtttg
cacggtgttggtgtttcggtggtcaacgctctcagcgagtgggttgaggtcaccgtccgc
cgccagggtcaggtccatcgccaacggtttgagcggggtgccccgatcggcacgcttcgt
tcagaaccgttgcccgctggtcaggacgaccagacgggcacgtcggtctgcttcaaaccg
gatgcggagatcttcaccgttggcattgttttcgactacgccactttggctgcgcgtctg
cgagaacttgcctacctcaacggtggggtgcgcattgttttccgtgatgaacgggagtca
tctcgaacggccgatggtgaagcccatgaagaaatctacttttacgagggcggtatcaag
gaatatgttgcctacatgaatgcggagaaagatgctctgcatccagacattatttatgtc
aattccgagaaggatggcgttcaagttgaagcagcgctgcagtggtgttctgatgcctac
tctgacagcattcttggatttgcgaacaacattcgtaccgttgatggtgggacccatatc
gaaggcctcaagacggtcctgacccgcaccttgaatgcttttgccaaaaagctcgggaag
cgtaaggaatctgattcgaatctggctggcgaaaatattcgcgagggattgacggctgtg
ctgtcggtgaaagttccggagccggaatttgagggtcagaccaagaccaaacttgggaac
actgaagtgcgcggcattgttgataatctcgtcggtgaagcacttggccagtttttggaa
ttcaatccatccgtgattggattgattcttgagaaagccattcaggctttcaatgctgcg
gaagcggcccgacgcgctcgtgagttggtcaggcgcaaaagtgttctggagagttcaaca
cttcctggcaagctttccgattgcagttcccgcgatccttccgagtccgagatttacatc
gtggagggcgactctgctggtggttcggccaaacagggacgtgatcgtcgctttcaagcg
attcttccgctgcgcggaaaaattctcaatatcgaaaaaacagatgatgccaagatctac
aaaaatactgagattcaggctctgatcactgccctcggtctgggaattaaaggggaagat
tttgatgaaaaaaatctgcgttaccaccgcgttgtgatcatgaccgacgctgatgtcgat
ggtgcccacattcgaacattactgctcaccttcttttaccgttatcagaaggatcttgtc
gaaggtggttacatctatattgcctgtcctcccctttataaggtcgagcgcggcaagaac
cacacctattgctacaacgaggccgatttacagaaaacgctggatggttttggtgagaaa
gccaactacaccattcaacgcttcaagggccttggcgagatgatgcccaagcagttgtgg
gaaaccaccatggacccgacaacccggatgatgaagcgtgtggaaatcgaagacgcgctc
gaggctgaccgcatcttcaccattttgatgggcgacaaggtggctcctcgtcgggaattc
attgaaacccacagcgctgagttggatatggctgcactcgatatctga
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