Synechococcus sp. KORDI-100: KR100_01800
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Entry
KR100_01800 CDS
T03344
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR100_01800 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synk03400
]
KR100_01800 (ruvB)
Enzymes [BR:
synk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR100_01800 (ruvB)
DNA repair and recombination proteins [BR:
synk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR100_01800 (ruvB)
RecFOR pathway proteins
KR100_01800 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_14
AAA_16
AAA_22
TIP49
nSTAND3
AAA_25
TsaE
AAA_18
AAA_33
DUF815
AAA_24
IstB_IS21
Rad17
AAA_28
AAA_17
RNA_helicase
bpMoxR
Sigma54_activ_2
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AII42141
UniProt:
A0A076GYA8
LinkDB
All DBs
Position
359722..360780
Genome browser
AA seq
352 aa
AA seq
DB search
MAIVSSSADRSRPSPERPSNEVLNSSPTPDEVGSRPDDGLRPRRLDDYIGQAELKQVLGI
AVKAAIARGDALDHVLLYGPPGLGKTTMALVLAEEMGVSCRITSAPALERPRDIVGLLVN
LQPRELLFIDEIHRLTRVAEELLYPAMEDRRLDLTVGKGSTARTRSLELPPFTLVGATTR
AGSLSSPLRDRFGLIQRLEFYNQADLEAIVARTAGLLGVSLTAPACSRLAGCSRGTPRIA
NRLLRRVRDVASVQGSQDAIDESLVAQALSLHRVDHRGLDASDRRLLIMLINQHGGGPVG
LETLAAALGEDASTLESVVEPFLLQQGLLVRTPRGRMVTDAARAHLDGAEAA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgattgtctcctccagcgcagatcgcagtcgtccgtcaccggagcgcccatccaat
gaggtgctcaattcctctcccacgcccgacgaggttggctccaggcccgatgacggactg
cgtccccgtcgcctggacgattacatcggacaggccgagctgaagcaggttctcgggatt
gccgtgaaggcagcgatcgctcgcggtgacgccctcgatcacgtgttgctctatgggccc
cctggactgggcaaaaccaccatggctctggtgctggccgaagagatgggggtgtcctgc
aggatcaccagcgctccggctctggagcggccgagagacatcgttgggctgctggtgaat
ctgcagccacgggaactgctgttcattgatgaaatccaccgtctgaccagggtggcggaa
gagctcctctatccggcgatggaagaccgtcgcctcgacctcacggttggcaagggcagc
acagcccgtacgcgatccctggagctgccccccttcacgttggtgggagccaccacccgc
gccggctcactcagctcgccgctgcgggatcgctttggcttgatccaacggctggagttc
tacaaccaggccgatctcgaggcgatcgtggcgagaaccgccgggttgctgggggtttcc
ctgacggcgccggcctgctcgagacttgccggctgcagccgaggaactccgaggatcgcc
aaccgtttgctgcgccgggtccgtgatgtggccagcgttcagggttcccaggatgcgatc
gatgagtcactggtggcccaggccctgagcctccaccgcgtcgatcatcgcggcctcgat
gccagcgaccggcgtctgctgatcatgttgatcaatcagcacggcggcggacccgtcggc
ctggagacgctggcggcggctctgggcgaggacgcctccaccttggagtccgtcgtcgaa
ccgtttctgctgcagcagggcctgctggtgcgcactccccggggacgaatggtcaccgat
gctgctcgtgcccacctcgatggagcggaggcggcgtga
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