Synechococcus sp. KORDI-100: KR100_01885
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Entry
KR100_01885 CDS
T03344
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
synk
Synechococcus sp. KORDI-100
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KR100_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synk03019
]
KR100_01885
03009 Ribosome biogenesis [BR:
synk03009
]
KR100_01885
03036 Chromosome and associated proteins [BR:
synk03036
]
KR100_01885
Enzymes [BR:
synk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
KR100_01885
Messenger RNA biogenesis [BR:
synk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KR100_01885
Ribosome biogenesis [BR:
synk03009
]
Eukaryotic type
90S particles
RNase
KR100_01885
Prokaryotic type
rRNA processing factors
KR100_01885
Chromosome and associated proteins [BR:
synk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
KR100_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AII42156
LinkDB
All DBs
Position
complement(376543..377256)
Genome browser
AA seq
237 aa
AA seq
DB search
MKRLPAERSQQLIGFLVAIEPTWKDAIQDLQVIDEAMTHTSARLGRNHERLEFLGDAVLR
LACTDFIDQQLPELSVGQRSELRAQLVSDQWLADLGESIAIETILKVGADAKGDRQALKT
LRAEATEALIGALYLQDQGLNLVHHWLDPRWVGSAKEVLDHPHRYQSKSALQEWSQARKI
GRPRYITEENNRIHGDLKRFHTSVLLNDQLAAEAWGRSRKEAEQKAAEAALQTLDAL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattacctgcagagcgctcacaacagttaatcggcttcctcgtcgccatcgag
ccgacatggaaggacgcgattcaggatttacaggtcattgatgaagcgatgacccatacg
tctgcacgtcttggcaggaatcatgagcgtcttgaatttcttggagacgctgttctgaga
ctggcctgtacagactttatcgatcagcagttgccagaactcagcgttggacaacgatcc
gaacttcgggcccaactggtgagcgaccaatggcttgctgacctgggcgaatccatcgcg
atcgaaacaatcctgaaggtcggagctgatgccaagggcgaccggcaggccctcaagacc
ttgcgagccgaggcaacggaagctctgatcggtgccctgtaccttcaggatcaaggcctg
aacctggtgcatcactggcttgacccccgttgggtaggcagcgccaaagaggttctggat
catccgcaccgttaccagagcaaatcggccctgcaggaatggagccaggcgcgcaagatc
ggacgtccgcgctacatcacggaagagaacaatcgcatccatggcgacctcaaacgcttt
cacacctctgttctgttgaatgatcagctcgctgccgaagcctggggacgctccaggaag
gaagctgagcaaaaggcggccgaggccgctcttcaaacgctggacgctttgtga
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