Synechococcus sp. KORDI-100: KR100_03270
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Entry
KR100_03270 CDS
T03344
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KR100_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synk03021
]
KR100_03270
03400 DNA repair and recombination proteins [BR:
synk03400
]
KR100_03270
Enzymes [BR:
synk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KR100_03270
Transcription machinery [BR:
synk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KR100_03270
DNA repair and recombination proteins [BR:
synk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KR100_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AII42412
UniProt:
A0A076H0P2
LinkDB
All DBs
Position
complement(657448..658386)
Genome browser
AA seq
312 aa
AA seq
DB search
MLQYQIDRIEHQVAEDRAQTGVFLIGPLERGQATTLGNSLRRVLMGGLEGSAVTAIRIAG
VNHEYATIPGVREDVLDILLNCKQLSVNSRSSELEIGRLVIAGPAEVKAKDLQFSSQVQV
VDGDRPIATVADGHSIELEVHVERGVGYRPVDRNNEDLSAIDLLQIDAVFMPVRRVNFNI
DETAVAEGGSARERLRMEIVTDGSITPDDALAQSANQLIELFQPLATVTLVEEPGIEPEP
STEAQIPLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALER
IGISIPQSRTTA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcagtatcagatcgatcgcatcgagcatcaggtagccgaagatcgcgcccagacc
ggcgtattcttgattggtccgcttgagcgaggccaggccaccacgcttggcaattccctg
cgccgcgtcctgatgggaggacttgaaggcagcgccgtgacggccatccgcattgctggc
gtcaatcacgaatacgcgacgattcccggggttcgggaggacgtcctggacatcctgctg
aactgcaagcagctgtctgtgaacagccgctcctccgaactggagatcggacgactcgtg
attgccggacctgccgaagtgaaggccaaggatcttcagttctcgtcccaggtccaggtg
gtcgatggagatcggccgatcgccaccgtggccgacggccacagcattgaacttgaggtt
catgtcgagcgcggcgtcggttaccgaccggttgatcgcaacaatgaagatctcagtgcg
atcgacctcctgcagatcgacgccgtgttcatgccggtgcgtcgggtgaacttcaacatc
gatgaaaccgccgtcgccgagggcggttctgctcgtgaacggcttcgtatggagatcgtc
acggatggatccatcacgccggacgatgccttggcgcagtcggcgaatcagctgattgag
ctcttccagccactggccacggtgaccctcgtggaagagcctggaatcgagccggaaccc
tccacggaggctcagatccctctcgaggagctgaacctttcggtgcgtgcctacaactgc
ctgaagcgagctcaggtgaactccgtctccgacctgatgggcttcagctacgaagacctg
ctggagatcaagaacttcggctccaaatcagcggacgaggtgatcgaggccctcgagcgc
atcggcatctcgattcctcagagccgcaccaccgcctga
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