KEGG   Synechococcus sp. KORDI-100: KR100_07350
Entry
KR100_07350       CDS       T03344                                 
Name
(GenBank) hypothetical protein
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
synk  Synechococcus sp. KORDI-100
Pathway
synk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:synk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KR100_07350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:synk03400]
    KR100_07350
Enzymes [BR:synk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     KR100_07350
DNA repair and recombination proteins [BR:synk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KR100_07350
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: AII43177
UniProt: A0A076H2Q6
LinkDB
Position
1326441..1330028
AA seq 1195 aa
MTQRFDANTYPLDAGVRLLEASAGTGKTFALAHLSLRLITEAAMPLDSLLVVTFTDAAAA
ELRSRIGRRLQDALLGLEALERRQPLPEADQVLKDWWRDSPDDRNRRDWISRLLLALEQL
DAADITTIHGFSRRSLRRQAISSGAAMQLQLETDSTALVQEVVQEIWQQQLLSLPLGQLA
GLEQAGFSFEGLCAALGGLDGDPQARLAVDAEDLSPDQPLADQLQHSIETDWQLFLTLWM
RDGAALEQAFRAAATQWKALTFKTTPYSASPRTDRVAQVDQWIAAQQGTPDLMTIRGLEK
PLHDYFHPGVWCRTARKCGEQDPSLAAAELQRAIADLWDGPIERVWRYALRRGLQALEDR
RRRSGVISFAGLLAEMDPGAGEAAWLEPLRQRYRAVMVDEFQDTDPTQWRLLQSAFADRS
RFLLLVGDPKQAIYRFRGGDLDTYRRARDQVDRIDDLLDNFRTTEPLMAGLNALMQPGLP
CSGLDVPLVRACSDREPAELPEGEWPLKVLIHERHAETSRTAVEELLPAQLAEVVIRLLS
DRPRLVPSQLCILVSRHDQAADLRRALAERGVPTRLVAQGDVFESEAAGVLQRLMDALAA
PGDDRCLRLLAASPLLGWRPEALRRAVEDDQLDQLAQRLRLWADQLPRVGLLGCLADLLE
ADRMADLSERGRLLADLQQAGRLVQEEMHRQGLDVSSAAQWLRRQRLHPPVPVPDAREPH
SDLAESAVAVVTVHRSKGLEFPVVICPYLWRGAKEARYLFGPLWRDRGDAGWRIALSRDW
GAGWRLWQQSHADEVAEAERLAYVAVTRARSQLLLVWARCSGQRTVLQDWLFDGDPEQDR
MRVLPFTVEPLPEEPGLQRWSPPQPQDPLALGAVPARIDRRWGRSSYSAWIASPAADPLI
EQGRDQDPAAVDALDAGQERWPERGPLADFPRGAAAGDCLHRILEELPFQPSSRRQGSLE
NELIEQELQRAGLDPGWSSAVQLGLEQVLSTPLGGPLGDISLQTLSPDRRLHELSFDLPV
QQARTLDLVDAFRLDPEARFGSDYIPQLRTLQVNSRGFLTGSIDLVFSDAPDPHQARWWV
ADWKSNWIGERALAGENCRCGPRHYHDAAMQAQMLDHHYPLQAHLYLVALHRHLRWRLPG
YAPERHLGGYVYVFLRGMPGAEGFEQGAQGPGRIVEPAPLQRVLALDRMLQEVEP
NT seq 3588 nt   +upstreamnt  +downstreamnt
atgacccagcgcttcgacgccaacacctacccgctcgatgctggcgttcgattgctcgag
gccagcgccggcaccggcaagacgtttgcgcttgcccatctcagcctgcggctgatcacg
gaagcggccatgccgctcgacagccttctggtggtcaccttcaccgatgcggccgcggcg
gagttgcgatccagaatcggccggcggctgcaggatgccctgctggggctcgaggccctc
gagcggcggcagcccctaccggaagcggatcaagtcctgaaggattggtggcgcgacagc
cccgacgaccgcaaccgccgcgactggatcagtcgtctgcttctggctctggagcagttg
gatgcggcagacatcaccacgattcacggcttctctcgccgcagccttcggcgccaggcg
atcagcagcggcgcagcgatgcaactgcaactcgagaccgactccacggccctggtgcag
gaggtggttcaggagatctggcagcaacaactgctctcgctgccgcttggccagctggcg
ggactggagcaggccggcttctcctttgaaggcctctgcgctgccctgggcggactggat
ggggacccccaggctcggcttgccgtcgatgcggaggatctgtctcccgaccagcccctg
gccgaccagctgcagcactcgatcgagacggattggcagctgttcctcacgctctggatg
cgggatggcgctgctctcgagcaggccttccgagccgcggcaacccagtggaaggccctc
acgttcaaaaccacgccctacagcgcctcaccccgtaccgaccgcgttgcccaggtcgat
caatggatcgcggcgcagcaaggcaccccggatctgatgaccatccgcggcctggagaag
ccgcttcacgactacttccatcccggcgtctggtgccgaacggcacggaaatgcggtgaa
caggacccgtcgctggcggcagcggagctgcagcgagccattgcggatctctgggatggc
ccgatcgagcgcgtctggcgatatgccctgcgccgcggccttcaggctctggaggaccgt
cgccggcgcagcggcgtgatcagcttcgccggtctcctggctgagatggatcccggagct
ggcgaggcggcctggctggaaccactgcgtcagcggtaccgagcggtgatggtggacgag
tttcaggacaccgatcccacccagtggcgtctgcttcagagcgcttttgccgatcgctcg
cgattcctgttgctggttggagacccgaagcaggcgatctaccgcttccgggggggtgat
ctggacacctaccgccgcgcccgggaccaggtggatcggatcgacgatctgctcgacaac
ttccggacgacggagcccctgatggctgggctgaatgccctgatgcaacccggcctgccc
tgctcaggccttgacgtgccgttggtgagggcctgcagcgaccgggagccggcggagctt
ccggagggcgaatggcccctgaaagtgctgatccacgagagacacgcagagaccagccga
acggctgtggaggagttgctgccagcgcagcttgcggaggtggtgatccgcctgctgagc
gatcggccgcggctcgtcccgtcacagctgtgcatcctggtgagccggcacgaccaggct
gcggatctccgtcgcgccttggccgagcggggagttcccacccgactggtggctcagggc
gacgtcttcgagagcgaagcagcgggggtgttgcagcggctgatggatgccctggcagcc
cctggagacgatcgctgtctgcggctgctggcggcatctccgctgctcggctggcgtccc
gaggcgctgaggcgggcggttgaggatgaccagctcgatcagctggctcagcgtctgcgt
ctctgggccgatcaattgccccgtgtgggtctgctcggttgtcttgcggacctgctggag
gccgatcggatggcggatctttccgaacgcggtcgcctgctggccgacctgcagcaggcg
ggccgtctggtgcaggaggaaatgcaccgtcagggtctggacgtctccagcgctgcgcaa
tggttgcgtcggcagcgcctgcatcctccggttcccgtgccggacgcccgtgaaccccac
agtgatctggccgaaagcgccgtggccgtcgtcacggtccatcgcagcaagggcctggaa
ttccccgtggtgatctgtccctatctgtggcgtggggccaaggaggcgcgatacctgttc
ggaccgctctggcgtgaccggggtgacgcgggctggcggattgccctgagccgcgactgg
ggtgccggctggaggctgtggcagcagagccatgccgatgaggtggcggaggctgaacgg
ctggcctatgtggctgtgacgcgggcccgttcccagctgctgctggtgtgggctcgctgc
agtggccagcggacggtgctgcaggactggctgtttgacggcgatcccgagcaggaccgg
atgcgcgtcttgccgttcacggtggagccgctgccggaggagccgggtcttcaacgctgg
agtccgccgcagccccaggatccgctcgccctgggagccgtgccggcgaggatcgatcgc
cgctggggccgctccagttattccgcctggatcgcctcaccggcggccgaccccctgatc
gagcagggccgggatcaggacccggcagcggtggatgcactcgacgcaggccaggagcgc
tggcccgagcgggggccgttggcggacttcccccggggcgcggccgccggagactgcctg
catcgcatccttgaggagctgccctttcaaccgtcctcgcggcggcaggggtctctcgag
aatgagttgattgaacaggagctgcagcgggccggcctggatccgggctggagttcggcg
gtgcagctgggactcgaacaggtgctcagcacgcccctgggcggccctttgggagacatc
agcctgcagacactctcacccgatcggcgtctccatgagctcagtttcgatctcccggtg
cagcaggcccgcaccctggatctggtggacgccttccgcctggatccggaggcgcgcttc
ggcagcgattacatcccccagctgcggaccctgcaggtgaacagtcgcggcttcctgacg
ggctcgatcgatctggtcttcagtgatgcccctgaccctcatcaggcccgctggtgggtg
gccgactggaagagcaactggatcggcgagagggcactggccggtgagaactgccgttgc
ggtccccgccactatcacgatgcagcgatgcaggcgcagatgcttgatcatcactacccg
ctgcaggcccatctctaccttgtggccctgcatcgccaccttcgctggcggctgcccggt
tatgcaccggagcgtcatctcggcggctacgtctatgtgtttctgcgcgggatgcccggg
gccgaggggttcgagcagggggcccagggtccgggtcgcatcgttgaaccggctcccctg
caacgggtgcttgctcttgatcggatgctgcaggaggttgagccatga

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