Synechococcus sp. KORDI-100: KR100_07355
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Entry
KR100_07355 CDS
T03344
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR100_07355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synk03400
]
KR100_07355
Enzymes [BR:
synk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KR100_07355
DNA repair and recombination proteins [BR:
synk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR100_07355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
UvrD_C_2
AAA_22
UvrD-helicase
PhoH
AAA_16
nSTAND3
SLFN-g3_helicase
AAA_28
NAT10_TcmA_helicase
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AII43178
LinkDB
All DBs
Position
1330025..1331578
Genome browser
AA seq
517 aa
AA seq
DB search
MSSSWPAAFAGAVHAALRRRLPPEADGAELERLSLELIEALERGELDLPLTLERRTAAAR
SGWLDGEASPLLLQGQRIGWRRWLESMQAVVEQLLVRTQPLLPPARPVTSSADTLNPEQQ
AAVMALDEAPVVLLSGGPGTGKTSTVVELLQRATSRHPELRPGLAAPTGKAARRLADAVR
PRLQDVPCFTLHRWLEASGDGFRRHRKRPLELDLLVIDEMSMVDLALMTALLEALPASCR
LVLVGDPAQLPPIGSGAVWHRLQDPAIRSQFGSAAIHLQRTYRNRGALADLARALREGGL
PAFREQLDRLPSQANVTVVEARLQRLPPLVRERWQTRHRRLATLAEGLVDRPEHELQQAA
EPLLRELERDLLLCPRRQGPWSLNDVHRTLLGAAAWNDPMAWGEGVPVICGGNQPELGLA
NGDLGVKLGAGEQGRVLFRVIGPDGEQQVRRLHPARLKALEPALALTIHRAQGSEADTVG
VLWPQGDGQDSAYDSCLLYTAITRARVSLDLFLSTST
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctggcccgcagcgtttgccggcgcggtgcatgccgccctgcggcgccgt
ctgccacctgaggctgatggggcggagctcgaacggctcagcctggagctgatcgaggcc
ctcgaacgcggtgagctggatctgccgctcacgctggaacggcggacagccgctgcccgg
agcggttggctcgatggcgaagcctccccgttgttgctgcaggggcaacggatcggttgg
cgtcgctggttggagtcgatgcaggccgtggtggagcagctcctggtcaggacccagccg
ctgttgccgccagcccggccggtgacgtcctctgcggacacgctcaacccggaacagcag
gccgctgtgatggcgctggatgaggcgccggtggtgctgctcagcggtggacctgggacg
ggaaagaccagcactgtcgtggaacttctgcagcgtgcgacgtctcgtcatcccgaattg
cgccccggtctggcagcgcccaccggcaaggcggcaaggcgtctggccgatgcggttcgg
ccacggttgcaggacgttccctgcttcaccctgcatcgctggctggaggcctccggtgat
ggtttccgtcgccaccgcaagcgtccgctggagctggatctgctggtgatcgatgaaatg
tcgatggtggatctggccttgatgacggcgttgctggaggccctgccggcgtcctgtcgg
ttggtgttggtgggtgatccggcccagctgccgccgattggcagcggcgccgtctggcac
cgcctgcaggacccggccatccgctcacagttcggatcggccgccattcatctgcaacgc
acctatcgcaaccgcggcgccctggcggacctggcgagggcccttcgtgagggcggtttg
cctgcgtttcgtgagcagctggaccgtttgccgagccaggccaacgtgaccgtggttgag
gccaggctgcagcggttgccgccactggtgcgcgagcgctggcagacgcgccatcggcgc
ctggcgaccctggccgaggggctggtcgatcgaccggagcatgagctgcagcaggccgct
gaaccgctgctgcgggagctggagcgggacctgctgctctgcccgcgtcgacagggcccc
tggagcctcaacgacgtgcatcgaacgttgctgggcgccgccgcctggaatgatccgatg
gcctggggcgaaggggtgccggtgatctgcggtggcaatcagccggagctggggctggcc
aatggggatctcggcgtgaagctgggtgccggcgagcaggggcgtgtgctgttccgtgtg
atcggcccggacggagagcagcaggtccggcgtctgcatccggcccgtctgaaagcgttg
gagccggccctggcgctcacgatccaccgtgctcagggcagtgaggcggacaccgtgggt
gtgctgtggccccagggggatggccaggacagcgcctacgacagctgcctgctctacacc
gcgatcacacgggcccgtgtcagcctggatctgttcttatccacgtcgacctga
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