KEGG   Synechococcus sp. KORDI-100: KR100_08520
Entry
KR100_08520       CDS       T03344                                 
Name
(GenBank) hypothetical protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
synk  Synechococcus sp. KORDI-100
Pathway
synk03410  Base excision repair
synk03430  Mismatch repair
synk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:synk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KR100_08520
   03430 Mismatch repair
    KR100_08520
   03440 Homologous recombination
    KR100_08520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:synk03400]
    KR100_08520
DNA repair and recombination proteins [BR:synk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     KR100_08520
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     KR100_08520
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      KR100_08520
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: AII43403
UniProt: A0A076H2M3
LinkDB
Position
complement(1562595..1564556)
AA seq 653 aa
MQARPLIAEHNAVRQGRSLPQTLSETKHSWIWSLPAVIEPDPLSGCDLSLPLRCLLMRRG
IKTVQEAFDLLDPPALPDPSTQFPDLRAAVERISRACREQEALAICGDYDADGMTSSALL
LQALTPLGARPTVAIPSRSDDGYGLNPRMVQELHDSGIRVLITVDNGVSARKALELASEL
AMEVIVTDHHTIPEERPPMAALIHPATTPQTSPYRGLAGVGLAYVLALAVAEDLQRPEAI
RSARDLFCIGTVADMAPLQGANRRWLHEGLRHLHRTDCAGLKALQRLAGLDDRPLRSDDI
GFQIAPRINAVGRLGEPSLVVDLLTSVDADVAMGLARRCDDYNRQRRDLCDAIEAEAVAL
IEADTGGLPPFLLLAQSHWHHGVIGIVAARLVERYHRPAALLAGEGNGMLRASVRAPKGF
AVDAALKACHTLLDRYGGHPAAGGFTVVAAHVSALHAQLNDLAQHWLSGAGEGLPVQPEA
LLRLSQIDWELWSELQKLEPFGVGNEAPLFWARDCAVLNSRLLSGGHLSLTLSQDDVQRR
AIAWRWRSEEALPERCDVAFTIGMNRWKGETRVQLELKALRQHSECIDLVRGDHRYNARR
VSETGLAVRNDEGQEICAEIKPGSTLISNDPLARHPMVLQLLEEASLGLGLRP
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgcaggccagaccgttgattgcagagcacaatgctgtccgacagggccgctccttgccc
caaacgttgtctgaaaccaagcattcctggatctggtcccttcccgcagtcatcgagccg
gatcccctgtcgggatgcgacttgtcgttacctctgcgttgtctcttgatgcggcgaggc
atcaagaccgtacaggaggccttcgatctgctcgatccaccggcacttccggatccgagc
acgcagttccctgatctcagagcagcggtcgagcgcatcagccgtgcttgcagagaacag
gaggctctggcgatctgtggtgattacgacgccgatggcatgacgagcagtgcccttctg
ctgcaggcactgaccccgttgggggccagaccgaccgtggcgattccatcgcggagtgat
gacggctacgggctgaatccacgcatggttcaggagctgcatgactccggcatcagggtt
ctgatcaccgtcgacaacggcgtttcagcgcggaaggcactcgaactggccagcgagctc
gccatggaggtgatcgtcacggaccaccacaccatccctgaggaacgcccgccgatggcg
gcgctgattcatccggccacgacaccccaaacctcgccctatcggggtctggccggcgtg
ggacttgcctatgtgctggcattggcggtcgcagaggatctgcaacgaccagaagcgatc
cgctcagcaagggatctgttctgcatcggcacagtggccgacatggccccgttgcagggg
gcgaatcgacgctggctgcatgagggactgagacatctgcaccgcacggactgtgctggg
ctcaaagcccttcagcgactggctggactggacgatcggcccttgcgcagcgacgacatc
ggttttcagatcgcccctcggatcaatgcggtcgggcgtctcggggagcccagtctggtg
gtggatcttctgacatccgtggatgcggatgtcgccatggggctggcacgacgctgcgat
gactacaaccgtcagcgacgggacctttgcgatgcgatcgaagccgaggccgttgctctc
atcgaagcggacacgggggggctgcctccctttctgctgcttgcccagtcccactggcat
cacggcgtcatcggcattgtcgcggcacgtcttgttgagcggtaccaccggcctgcggcc
ctactcgccggtgaagggaacggcatgttgagggcatcggtgcgagcaccgaagggcttt
gccgttgatgctgctctcaaggcttgccacacgctcctggaccgctacggagggcatccc
gctgccggtggtttcaccgtggtcgctgcccatgtcagtgcactgcatgcgcagctgaat
gacctggcgcagcactggttgtccggcgccggagaggggctcccagttcagccggaagcc
ctcctacgtctctcacagatcgactgggaactctggagcgagctgcagaagcttgaaccc
tttggtgtcggcaacgaagcgcccctgttctgggcgagagattgcgcagttttgaactcg
cgccttctcagtggtggccatctctctctcacactcagtcaggacgatgttcaacgacgc
gccatcgcctggcgctggcgcagcgaggaggcgttgccggaacgctgtgatgttgcgttc
accatcggaatgaaccgctggaagggtgaaacccgtgtgcaacttgagctgaaagcgctc
aggcagcacagtgaatgcattgatctggtgcgcggcgatcaccgctacaacgcccgtcgc
gtctcagaaacagggcttgctgttcgtaatgatgaaggtcaggagatctgcgcggagatc
aaaccgggatcaaccctgattagcaacgaccctctcgctcgccacccgatggtgcttcaa
cttcttgaggaggcctctctcggtcttggactgagaccttga

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