Synechococcus sp. KORDI-100: KR100_09140
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Entry
KR100_09140 CDS
T03344
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
synk
Synechococcus sp. KORDI-100
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synk03021
]
KR100_09140
Transcription machinery [BR:
synk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KR100_09140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_24
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AII43524
UniProt:
A0A076H7L3
LinkDB
All DBs
Position
1693285..1694094
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AA seq
269 aa
AA seq
DB search
MNRSIRKRICQRREAHRGLDPAISQRNQSLLEHLGLAHLAARRQASKGSEDYDDLFQESS
IGVLSAIERFDPSRGFQPSSYLISRATGQILHYRRDRAQCFRIPWRLRDLAVNAARIQQQ
NETIGKPRLTDQELANRLGVSLGRLQQALEAVRMARLGRLDQGSDDPEGPKACCQLEQLE
QPEADQDHQRDWLLTVFGDLEPNHQQWLRGYYIERMSLVSMSRCFGVSRARIKSGIQDAV
QQLQRWARRDGELLPEPWQVLRPTGFAGH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgatccatccgcaaacgcatttgtcaacgccgcgaagcccatcgcggcctcgat
ccggccatcagccaacgcaaccagtcgctgcttgagcatctggggctcgcccatctcgcc
gcacggcgtcaggccagcaaaggaagcgaggactacgacgatctttttcaggaatccagc
atcggcgttctgagcgccatcgaacgctttgatcccagccgcggctttcagccgagcagc
tacttgatcagccgcgccacaggccagatcctgcattaccgccgcgatcgtgcgcaatgc
tttcggattccctggcgcctgcgcgatctggccgtgaacgccgcacggatccagcagcag
aacgagacgatcggcaaaccgcggctcactgaccaggagctggccaacaggctcggcgtc
agcctgggacgcctgcaacaggcccttgaggctgttcggatggcgcgcctggggcgtctc
gaccagggaagcgatgaccctgagggcccgaaggcatgctgccagcttgaacagctcgaa
caacctgaagctgatcaggatcatcaaagggactggctgctgacggtgttcggcgatctt
gagccgaaccaccagcaatggctgcgtggctactacatcgagcgcatgagcctggtgagc
atgagccgctgcttcggcgtcagtcgagccaggatcaaatccgggatccaggacgccgtt
caacagctgcagcgctgggctaggcgagatggagaactgctgccagaaccatggcaagtg
ctgcggccaacagggtttgcagggcattga
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