Synechococcus sp. KORDI-100: KR100_09980 Help Entry KR100_09980       CDS       T03344                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism synk  Synechococcus sp. KORDI-100 Brite KEGG Orthology (KO) [BR:synk00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:synk03400]     KR100_09980 Enzymes [BR:synk01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      KR100_09980     5.6.2.6  RNA 3'-5' helicase      KR100_09980 DNA repair and recombination proteins [BR:synk03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     KR100_09980 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 Motif Other DBs NCBI-ProteinID:  AII43687 LinkDB All DBs Position 1830523..1833015 Genome browser AA seq 830 aa AA seqDB search MVQALDQQSRSATTIESISLEPIHAWFDRQGWTPLPFQRDTWHAYLEGSSGLIQVPTGSG KTLAAVMGPIARMLADEPERKGIRLLYITPLRALSRDLTLAIQEPIQAMQWPLRVGTRNG DSSSSERSKQLRSPPQILVTTPESLTLLLSNPKGEALFESLDTVVLDEWHELMGSKRGSQ TELCLSWLRQRRPQLQTWAISATIGNLEQAARHALGVHGEPVIITGAPARVTEIRSLLPD SIDGFPWAGHLGLRMYEQLVGAMNPGISTLLFTNTRNQSERWFQCLRFACPEMDGALALH HSAIDRSEREAIEASVKAGDIRWVVCTSSLDLGVDFQPVEQVVQIGSPKNLARLLQRAGR SAHLPGGTSQVLFMPTNALELLELSAVRRGLEQGLVEQRKPPIAPLDVLLQHLTGLACGS GFNPDDTLQTIRSAAAFEGLSDEQWQWCLRFLKDGGECLAAYPRYRKLEWDGEKRRFCIR EAAIARLHRLNIGTITAAPAITVRFVRGAVLGHVEETFIGQLKPKDVFFFSGRQLEFVRL RDMTAFVKVSTKKSRTVPAWAGGQMALSDLLTHHLRAEVDRAGRGELDTPELKALEPLLV RQQDLSVVPRADQLLVETCTTKEGSHLYAYPFEGRFVHEGIGFLWAARLTQLERGTITVS VNDYGFELLAPKGYPMAELLEDHHDDLLNADNLERDLEHALNLSELRRRRFRAIAQIAGL MNRGFPGSSKSTGQLQISASLLFDVFERHESGNLLLEQARREVLDEQLEISRLQAALERA KAQEFLHVETPRPGPLAFPLLVERLNNRMSNESVLERVQRMKDEAFRREG NT seq 2493 nt NT seq  +upstreamnt  +downstreamnt atggttcaagcgctggatcagcaatcaaggtcagcaacaacgatcgagtcgatctctctt gagccgatccacgcctggttcgatcgacagggctggacaccactaccgtttcagcgagac acgtggcatgcctacctcgaggggtccagcggactgatccaggtgcccacaggctcaggc aaaacgctcgctgccgtgatggggccgatcgcccgaatgctcgctgatgaacccgaacgc aaagggattcggctgttgtacatcacccccctgcgggccctcagtcgtgatttgaccctg gcaatccaggagccgatccaggcgatgcaatggccattacgggtcggtacccgcaatggc gacagctccagcagtgaacgcagcaaacagctccgttcgccaccgcagatcctggtgacg acaccggaatccctgaccctgctgctgagcaatccaaagggggaggctttgtttgagtcc ctcgacaccgtggtgctcgatgaatggcatgagttgatgggaagcaagcgcggcagtcag acagagctttgtctcagctggctgcggcaacgacgcccgcaactgcagacctgggcgatc agcgccacgatcggcaacctcgaacaggcggcgcgccatgccctcggcgttcacggcgag ccggtgatcatcaccggcgcaccagctcgcgtcactgaaatccgcagcctgcttccggat tccatcgatggatttccctgggcaggacacctggggctgcgcatgtatgaacagctcgtg ggcgcgatgaaccctggcatcagcacgctgctgttcaccaacacacgcaaccagtcggaa cgatggtttcagtgcctgcgctttgcctgtcctgagatggacggcgccctggcactgcac cacagcgccatcgaccgcagcgaacgggaagcgatcgaagcctcggtgaaagcgggggac atccgctgggtggtgtgcaccagctcgctggatctgggtgtggacttccagcccgtggag caggtggtgcagatcggcagcccaaagaatctggcgcgcctgctgcagcgggcgggtcgc tcggcccatcttcccggtggtacctcccaggtgttgttcatgcccaccaatgccctggag ctcctggaactgagtgccgtccggcgtggactcgaacagggtctggtggaacaacgcaag ccaccaatcgcaccgttggacgtgctgctgcagcacctcaccggactggcctgcggatca ggcttcaaccctgatgacaccctccagaccatccgcagtgccgccgctttcgaagggctg agcgatgaacagtggcaatggtgtctgcgcttcctgaaagacggtggtgaatgtctggcg gcctacccccgctacaggaagctggaatgggatggggagaagaggcgcttctgcatccgc gaggccgccattgccaggctgcatcggctcaacatcggcacaatcacggcagcaccggcg atcacggtgcgcttcgtgcgcggggccgtcctgggccatgtggaggaaaccttcatcgga cagctgaagccgaaggatgtgttcttcttctccggccgacaactcgaattcgtacggcta cgggacatgacggccttcgtgaaggtaagcaccaaaaaaagccgcaccgtgccggcctgg gccggcggccagatggccctctcagacctgctgacgcaccatctacgagccgaagtggac cgagccggtcgcggagaactcgacacgccggagctgaaggccctcgaacctctgctggtt cgacaacaggatctgtctgtggtgccaagggctgatcaacttctggtggaaacctgcacc acgaaggaggggagccatctctacgcctaccccttcgaaggccgtttcgttcacgagggc attggcttcctctgggccgcaaggctcacccagctggaacgtggcacgatcaccgtctcg gtgaacgactacgggtttgagctgttggctcccaagggctacccaatggccgaactgctc gaggatcaccacgacgacctcctgaatgccgacaatcttgaacgggacctggaacatgcc ctcaacctctcggaactgcgacgtcggcggttcagagccattgctcagattgctgggctg atgaaccgcggctttcctggctccagcaaaagcaccggacaactccagatcagtgcctca ctgctgtttgacgtcttcgagcgtcatgaatcgggcaatctgctgttggaacaggcacgc cgcgaagtcctcgacgagcaacttgagatttcaaggctgcaggcggccctcgagcgtgca aaggcccaggagtttctccatgttgaaaccccaagacctggcccgttggcattccctttg ctggtggaacggctcaacaaccggatgagcaatgaatctgttctcgagagagttcagcgc atgaaagatgaggccttccgcagggaagggtga

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