Synechococcus sp. KORDI-100: KR100_11615
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Entry
KR100_11615 CDS
T03344
Name
(GenBank) transposon TnsE
KO
K00554
tRNA (guanine37-N1)-methyltransferase [EC:
2.1.1.228
]
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk00900
Terpenoid backbone biosynthesis
synk01100
Metabolic pathways
synk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
KR100_11615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synk03016
]
KR100_11615
Enzymes [BR:
synk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.228 tRNA (guanine37-N1)-methyltransferase
KR100_11615
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KR100_11615
Transfer RNA biogenesis [BR:
synk03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KR100_11615
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
tRNA_m1G_MT
Motif
Other DBs
NCBI-ProteinID:
AII44003
UniProt:
A0A076H4B0
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All DBs
Position
complement(2053589..2054800)
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AA seq
403 aa
AA seq
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MARAPYRFDVVSLAPHCFDSLLQLGVLGRAFSAGIAELHRHNPRDFTVDRYRKVDDEPYG
GGAGMVLKPEPVFAAVESIPRREQSRVLLMSPQGQPLQQSDFQRWARDHDQLLLLCGHYE
GFDERIRSLADEEVSIGDFVLTGGELPAMTIINGVLRLLPGTVGTADSLVEESHSALLLE
HPHYTRPAVFQGMAVPEVLRSGDHGQIAAWRQQQREHRTQERRPDLYARWQDETMEPDAS
EAMQLRIGNGYDIHRLVPGRPLILGGVSLEHPKGLGLDGHSDADVLVHAVMDALLGALSL
GDIGRYFPPTDPKWKGADSLELLEQVVALVGERGWRVANVDAVVVAERPKLKPHVETMRG
NIAQRIGIAADAVGVKATTNEQLGAEGREEGISCHAVALLEKA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggcgccataccgattcgatgtggtgagcctggcgccgcattgtttcgacagc
ttgttgcagctcggagtgctcgggcgagccttcagcgcaggaatcgcggaactgcatcga
cataatcctcgggacttcaccgtcgaccgctaccgcaaggttgacgatgagccctatggc
ggtggtgccgggatggtgctgaaacccgagccggtgtttgccgcggtggaatccattccc
cgtcgtgaacagtctcgggtgctgctcatgtcaccccagggacaacctctccaacagagc
gactttcagcgctgggccagggaccacgaccagctgctgctgctctgtggccattacgaa
ggctttgacgagcggattcgctccctggccgatgaagaggtgtcgatcggtgatttcgtg
ctcaccggtggtgagctgccggcaatgacgatcatcaacggcgtgctgcggttgttgcca
ggcaccgttggtacggcggattcactggtggaggaaagccacagtgccctgcttctggag
catccccactacaccaggcctgcggtgtttcagggcatggccgtgccggaggtgttgcgc
agtggcgaccatggtcagattgcggcctggaggcagcagcagcgtgagcaccgtacccag
gaacgcagacctgatctctatgcacgctggcaagacgagacaatggagcccgacgcaagc
gaggccatgcagctgcgcatcggcaatggctacgacattcatcgtcttgttccgggtcga
cctctgatccttggaggcgtcagccttgagcatcccaaggggcttgggctcgatggtcac
agcgacgctgacgtgcttgttcatgccgtgatggatgctctgctcggcgccctgtccctg
ggagatatcggcaggtatttcccccccactgatccgaaatggaagggggccgacagcctg
gagctgctggagcaggtggtggcgctggtgggtgagcggggttggcgtgtggccaatgtg
gatgctgtcgtggttgccgagcggcccaagctcaaaccgcatgttgagacgatgagaggg
aacatcgcccagcgcatcggcattgcagccgatgctgttggagtgaaggccaccaccaat
gagcaactcggcgctgagggacgagaggagggaatcagctgccatgccgtcgcgctgctt
gagaaggcatga
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