Synechococcus sp. KORDI-100: KR100_12675
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Entry
KR100_12675 CDS
T03344
Name
(GenBank) DEAD/DEAH box helicase
Organism
synk
Synechococcus sp. KORDI-100
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Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_cyano_M
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
nSTAND3
ATPase_2
nSTAND_NTPase5
AAA_30
AAA_19
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AII44205
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Position
complement(2238738..2241509)
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AA seq
923 aa
AA seq
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MGPKAPAAMTEPGADGSAPLDPAAVFGFPLDDFQLEAIDALNQGHSVVVSAPTGSGKTLV
GEYAIHRALAHGQKVFYTTPLKALSNQKLRDFRQQFGDQNVGLMTGDLSLNREASIVVMT
TEIFRNMLYAEADEHDDPLADVEAVVLDECHYMNDSQRGTVWEESIIHCPPPVQLVALSA
TVANAGQLTDWIEKVHGPTQLVHSDYRPVPLQFSFCSAKGLHPLLNEQGTGLHPNCKVWR
APKGNKRRGRSPKPPQPEPPPISFVVAQMAERSMLPAIYFIFSRRGCDKAVRDLGVQCLV
SPKEQARIRERLTSYSEVNPEAVRDGLHADALLRGIAAHHAGVLPAWKELIEELFQQGLV
KVVFATETLAAGINMPARSTVIAALSKRTERGHRPLMGSEFLQMAGRAGRRGLDSRGYVV
TVQSRFEGVREAGQLATSPADPLVSQFTPSYGMVLNLLQRHDLEKARELVERSFGRYLAS
LDLVEEESTLSQLRLQLGQLEGVAGDVPWEDFEDYEKLRGRLREERRLLRILQQQAEETL
ANELTLALQFASSGTLVSLKSPQLRGRVTPAVIVEKVNGPGQFPLLLCLTDDNLWMLVPC
HSVVSLHAELSCLQVDSVVAPDLQRSGELRHGDQLSGALALAVAHMAGRHDMTTPQYDLA
GEVLTQARLVQTLEQEQDLHPAHRWGDRKQLKKHRRRMEELEEEIEERQRLLHHRANRHW
ETFLSLLEILQQFGCLVELEPTEIGRTVAALRGDNELWLGLALMSGHLDELQPAELAAVF
EAISTEVNRPDLWSGFPPPPAAEEALHDLSGVRRELLRTQERLNVVVPAWWEPELMGLVD
AWARGTAWTDLIANTSLDEGDVVRIMRRTVDLLAQVPFCEAISEQLRSNARLALKAINRF
PVCESPDLLKESSGLNPATERAA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgggacctaaggcgccggcggcgatgactgaaccaggcgccgatgggtcagccccgctg
gatcctgccgcggtcttcgggtttcctctagatgacttccagctggaggcgatcgatgcc
ctgaatcagggccactccgttgttgtcagtgctccgactggttccggcaaaacccttgtg
ggcgaatacgccattcatcgcgccctggcacatggccagaaagtcttctacaccacacct
ctcaaggctctctccaaccagaagctgcgggattttcgccaacagttcggtgatcagaac
gttggtctgatgaccggcgatctcagcttgaaccgcgaggcttcgatcgtcgtgatgacg
acggagatcttccgcaacatgctctatgcggaggctgatgagcatgacgacccactagcg
gatgtggaggctgtcgtccttgatgaatgccactacatgaacgactcccagcggggaacg
gtctgggaggaatcgatcattcactgtccgcctcctgttcagctggtggccctgtcggcc
acggtggccaatgcaggccagctcaccgactggatcgagaaggtccacgggcctacacaa
ctggtgcacagcgactaccgaccggtaccgcttcagttcagtttctgcagtgccaagggg
cttcatcccctgctgaatgaacaaggcacaggactgcacccaaactgcaaggtctggcga
gcacccaagggaaacaaacgcaggggccgttccccgaaacccccgcagccagagcccccg
ccaatcagttttgtggtggctcagatggcggagcgatccatgctcccggcgatctatttc
attttcagccgtcggggttgtgacaaggctgtgagggatctcggtgttcagtgtctggtg
agcccgaaggaacaggcgcgcatccgcgagcgcctgacgtcttacagcgaggtgaatccg
gaagctgtccgcgacggcctccatgcagatgctctgctgcgggggatcgccgctcaccat
gccggagtcctgccggcctggaaggaattgattgaggagctgttccagcagggactcgtc
aaggtggtgttcgccaccgaaaccctggcggctgggatcaacatgccggcccgcagcacg
gtgatcgctgctctttccaagcgcacggagcggggccaccggcctctgatgggcagcgag
tttctgcagatggctggccgggccggccgccgcggtcttgattcacgcggttatgtcgtg
acggtgcaaagccgctttgaaggcgtccgtgaggccgggcagcttgcgaccagtccggct
gatccgctggtcagtcagttcacgcccagttacggcatggtgctgaatctgctgcagcgt
cacgatctcgagaaggcacgggagctggtggaacgaagcttcggtcgctacctggccagc
ctggatctggtggaggaggaatcaaccctgtcgcagctgcggttgcaactcggtcagctg
gaaggggtcgctggcgatgtgccctgggaggactttgaggattacgaaaaactccgcggc
aggctgcgggaggagaggcgcctgctgcgcatcctccagcagcaggccgaggagaccctg
gccaacgaactcacgctggcactccagttcgccagctcgggaaccctggtgagcctcaag
tctccccagttgcgcggacgggtcactccagccgtgatcgtggagaaagtgaacggacct
ggccagtttccgctgctgctctgcctgacggatgacaacctctggatgctggttccctgc
cattctgtcgtcagtctccacgccgagctcagctgtctgcaggtggacagcgttgtggcg
ccggatctccagcgctccggtgaactgcgtcacggcgatcagctcagtggagcactggcg
ttggcggtggcgcacatggccggtcgtcacgacatgacaaccccccagtacgacctggcc
ggcgaggtgctcacccaggccaggctcgtccagacgctcgagcaggagcaagacctgcat
ccagcccatcgctggggagaccgcaagcagctcaagaagcaccgtcggcgaatggaggag
ctggaggaggaaatcgaggaacgccagcggcttcttcatcaccgtgccaaccggcactgg
gagaccttcctttccctgcttgagatcctgcagcagttcggctgtctggttgagcttgaa
ccgacggaaatcggtcgcaccgtcgctgccctgcgcggtgacaacgagctgtggcttggt
ttggcgttgatgagcggtcacctcgatgagcttcagcctgctgaacttgcggctgtgttt
gaagccatcagcacggaggtgaatcggcctgatctctggagcggttttccgccgccacct
gcggctgaggaggcgcttcacgatctctccggtgtccgccgcgagctgctgcgtacgcag
gaacgcctgaacgttgtggtgccggcctggtgggaaccggaactgatgggtttggtggac
gcctgggccagggggacagcctggaccgatctgattgccaacacatctctggatgagggc
gatgtggtgcggatcatgcgtcgcacggtggatcttctcgctcaggtgccgttctgcgag
gccatcagcgagcagctgcgctcgaatgcacgccttgctctcaaggcgatcaatcgcttt
ccggtctgtgaatcaccggatctgctcaaggaatcgtctgggctcaatccagcgactgag
agagcggcatga
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