Synechococcus sp. KORDI-100: KR100_12925
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Entry
KR100_12925 CDS
T03344
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
synk
Synechococcus sp. KORDI-100
Pathway
synk00020
Citrate cycle (TCA cycle)
synk00190
Oxidative phosphorylation
synk00650
Butanoate metabolism
synk00720
Other carbon fixation pathways
synk01100
Metabolic pathways
synk01110
Biosynthesis of secondary metabolites
synk01120
Microbial metabolism in diverse environments
synk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KR100_12925 (sdhA)
00650 Butanoate metabolism
KR100_12925 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
KR100_12925 (sdhA)
00720 Other carbon fixation pathways
KR100_12925 (sdhA)
Enzymes [BR:
synk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
KR100_12925 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
NAD_binding_8
Pyr_redox_2
HI0933_like
FAD_binding_3
GIDA
Pyr_redox
FAD_oxidored
Thi4
3HCDH_N
AlaDh_PNT_C
MurD-like_N
Lycopene_cycl
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AII44254
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Position
2285717..2287633
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AA seq
638 aa
AA seq
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MSGCPDPRLPGGPTAGAWQRCKEGFPLISPVRKGQIDLLVVGTGLAGASAAATLAQQGYR
VTVLTYHDSPRRAHSVAAQGGINAARPVAVDGDSIHRLFADTLRGGDFRAREAGCRRLAE
ISSGIIDQCVAQGVPFAREYGGSLATRSFGGALVSRTFYARGQTGQQLLYGAYQALMRQV
ELGRVTLLPRHDLLELITVDGVARGVVTRQTHTGELEVHTARAVLLCTGGYSNVYFLSTN
ALKSNASAIWRAHRKGALFANPCFTQIHPTCIPSGDAYQSKLTLMSESLRNDGRIWLPKQ
AGDNRTAHEIPEQERDYFLERMYPTYGNMTPRDVASRRARELCNAGHGVGPGGRSVYLDL
TDAIKTEGRDAIAARYGNLMTMYERISGDDPYRTPMRIYPAPHYTMGGLWVDYQLMSSIP
GLFVLGEANYSEHGANRLGASALMQGLADGYFIAPATVTAWLAGTPGSDLTSDHPACREA
LNSARARIGQLLDNGGHRPVDVFHRELGALMIDRCGISRHAEGLRDGLQRVAQLEAQFQN
EVRVPGGPEGPNPELEKALRVNDFFGLAQLMLRDALAREESCGAHFREEHQSAEGEAQRD
DVNFAHIAAWEFNDYGDPIRHQEPLQFTDLQPTTRSYR
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcccgatccacgcctgcctggcggtccgactgccggtgcctggcaaaga
tgcaaagaaggctttcccctgatcagcccggtgcggaaaggccagatcgacctgcttgtg
gtgggcaccggactggcgggtgcctcagcagcagcgaccctggcgcagcagggctatcgc
gtcaccgtgctgacttatcacgacagcccccgacgtgcccattctgtcgctgcccagggc
ggtatcaatgccgctcgacccgtggctgtcgatggcgacagcatccatcggctcttcgct
gacacgctgcgaggtggcgatttccgggcgcgggaagccggttgccggcggctggcagaa
atcagcagcggcatcatcgaccaatgcgtcgcccagggagtgcccttcgcccgggaatac
ggcggcagcctggcgacccgcagcttcggaggagcccttgtgagtcgcaccttctacgcc
cggggacagaccggtcagcagttgctctacggggcttatcaggccctgatgcgacaggtg
gagcttggacgggtgacgctgctcccccgccacgatctgctggagctgatcacggtggat
ggcgtcgcgcgcggggtggtgacccgacagacccacaccggagaactcgaggtccacacg
gcccgtgccgtgctgttgtgcactggtgggtacagcaacgtctacttcctgtcgacgaat
gcgctgaaatccaacgccagtgccatctggagagcccatcgcaaaggggcgttgttcgcc
aatccctgcttcacgcagattcatcccacctgcattccaagcggcgatgcctaccagagc
aagctgacgctgatgagcgaaagcctgcgtaacgacggacgcatctggctgccgaagcaa
gctggcgacaatcgaaccgcccacgagattccggaacaggagcgggattattttctggaa
cggatgtatcccacctacggcaacatgacaccgcgggatgtggcttcaagacgggcacgg
gagctctgcaacgcaggccacggcgttggtccaggcgggcgttcggtgtacctcgatctc
acagatgcgatcaagacagaaggacgcgacgccatcgcagcgcgctacggcaacttgatg
acgatgtacgagcgaatcagtggcgacgatccctatcgcacgccgatgcgcatctatcca
gcacctcactacacgatgggggggctgtgggtggactatcagctgatgagttcgatccct
ggcttgttcgtcctcggtgaagccaactactccgaacacggcgccaaccggcttggagcc
agtgccctgatgcagggcctggcggatggttacttcatcgctccggcaacggtgacggcc
tggctggccggaacacccggctcagatctgaccagcgatcatcccgcttgccgagaggcc
ctcaacagtgcacgggcccgcattggccagttgctcgataacgggggccacaggccggtg
gatgtctttcaccgcgagctaggtgccctcatgatcgaccgctgcgggatcagtcgccac
gccgaaggattgcgggacggtctccagcgcgtggcccagctggaggctcagttccagaac
gaggtgcgcgtccctggcggaccggaaggtcccaatccggaactggagaaagccctgcgg
gtgaacgatttcttcggactggcacagctgatgctgcgtgatgcgcttgcccgggaggaa
tcctgcggtgcgcatttccgtgaagagcatcagagcgccgaaggggaagcacaacgcgat
gacgtgaacttcgcccacatcgccgcctgggaattcaacgactacggagaccccatccgt
catcaggaacctctgcaattcacggatctgcaacccaccaccaggagttaccgatga
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