Synechococcus sp. KORDI-100: KR100_13305
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Entry
KR100_13305 CDS
T03344
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
synk
Synechococcus sp. KORDI-100
Brite
KEGG Orthology (KO) [BR:
synk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synk03016
]
KR100_13305
Enzymes [BR:
synk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KR100_13305
Transfer RNA biogenesis [BR:
synk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KR100_13305
Prokaryotic type
KR100_13305
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AII44326
LinkDB
All DBs
Position
2346153..2347112
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AA seq
319 aa
AA seq
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MQVTFLGTSSGVPTRARNVSAVALRLPQRAEMWLFDCGEGTQHQFLRSDLRLSQLRRIFI
THMHGDHVFGLPGLLASLGLSGNSNEGIDLYGPDPLEGFLSGALRNSSTRIGYPLTVHRS
RPAAETGTVLYEDDELLVRCTPLTHRVPAYAYRVEQKPLAGRFDVDRAKQLGIAPGPIYA
QLKRGESVKLEDGRVIDGRSLCGPDRDGVSVVYCTDTVFSEAAVNLALGADLLIHEATFA
HEEAEMALQKQHSTSTMAAQTAAEAGVGQLALTHLSPRYAPGNAVTADDLLAEARAIFPN
TVLARDFMQLDVTARCNSS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggtcacgtttctcggcaccagctccggcgtccccactcgggcccgcaacgtctct
gcggttgcactgcgacttccgcagcgggcggagatgtggctgttcgactgcggcgaaggt
acccagcaccagtttctgcgcagtgatctgcggctctcacagttgcgccggatcttcatc
acacacatgcacggggaccatgttttcggccttccaggcctgctggccagcctgggactc
tccggcaacagcaacgagggaatcgatctttacggaccggatcccctggagggattcctc
agcggggccctgcgcaacagctccacccgcatcggttaccccctgacagtccatcgcagc
cgaccagccgccgagacgggaaccgtcctgtacgaagacgatgaacttctcgttcgctgc
actccactgacccatcgcgtcccggcctacgcctaccgggtggaacagaagcccctggcc
ggacgatttgacgtggacagagccaaacaactcggcattgcaccagggccgatctacgcc
cagctgaaacgcggcgaatcggtgaagctcgaagacggccgcgtgatcgatggacgcagt
ctttgcggaccggatcgggacggtgtgagcgtcgtttactgcaccgacacggtgttcagc
gaagcggcggtcaatctggccttgggagcggatctgctgatccatgaagccaccttcgcc
catgaggaagctgagatggccttacagaagcagcactcgaccagcacgatggcagcgcag
accgctgcggaagccggtgtcgggcaactggcgctcacccacctcagtccccgctacgcc
ccaggcaatgccgtgaccgctgacgacctgctggcagaagctcgggcgatctttcccaac
acggttctggcccgcgacttcatgcaactggacgtgacagcccgctgcaacagttcgtga
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