Synechococcus sp. LA31: KJJ24_01770
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Entry
KJJ24_01770 CDS
T10468
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
synl Synechococcus sp. LA31
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KJJ24_01770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synl03021
]
KJJ24_01770
Transcription machinery [BR:
synl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJJ24_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QVV68944
LinkDB
All DBs
Position
complement(320151..321083)
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AA seq
310 aa
AA seq
DB search
MPPRHAPVASTVKTWLNTSSAHRPLCERTVMELSRRIQRWQQHPDGPSHAPKPVRRSALR
AREQLVRHNLGLVAHTWGRHRCSLPAHDDTTADALQEAALNLVRAAEKFDPAKGYRFSTY
ATFWVRRGFAEFEQRAKRAIRFPAEKAAVVLKALRLSQQHQASTGDEPALEWLAAQLKFD
GKAMSAERLAEFIRQWDATRTGSLDGAEDDSDDKGGCTRLDQASLLQASAQEQESESDPQ
HAALPQLMSCLDEQEHRLIRNRYLRRPPLSPCQLRRSMGGMQNEQLEQLEATALGKLRQV
ATEHNLKIQL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccgtcatgcccccgttgcctccaccgtcaaaacctggctgaacaccagcagt
gcccatcgcccactgtgcgagcgcacggtgatggaactctcccgccggattcagcgctgg
caacaacaccccgatggcccaagccatgcccccaagcccgtgcgccgcagcgccttgcgg
gcgcgggagcaactggtgcgccacaacctcggcttggtggcccacacctggggccgccat
cgctgcagcctgcctgcccatgacgacaccaccgccgatgcgctgcaggaagcagcgttg
aatctggtgcgcgcagcagaaaaattcgatccggccaagggctatcgcttctccacctac
gccaccttctgggtgcggcgggggttcgcggagttcgaacaacgcgccaagcgcgcgatt
cgcttcccggcggagaaagcagcggtggtgctcaaggctctgcgattgagccaacaacat
caggccagcacgggcgatgagccagcgctggagtggttagcagcccagctcaagttcgat
ggcaaggcgatgagcgctgagcgcctggcggagttcatccgccagtgggatgccacccgc
accggctcgctggatggcgcagaggatgacagtgacgacaagggtggatgcacccgcctg
gatcaggcgtctctgctgcaagcaagcgcacaggagcaggagtccgaatcagacccacaa
cacgcggccttgccgcagttgatgagctgcctggatgaacaggagcaccggctgattcgc
aaccgctacctgcgccggccgcccctgagtccctgtcaactgcgccgctcgatgggcggg
atgcaaaacgagcaactggagcagttggaagcaaccgcccttggcaagttgcgccaggtc
gccaccgagcacaacctcaagattcagctctga
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