Synechococcus sp. LA31: KJJ24_02595
Help
Entry
KJJ24_02595 CDS
T10468
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
synl Synechococcus sp. LA31
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KJJ24_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synl03021
]
KJJ24_02595
Transcription machinery [BR:
synl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJJ24_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
HTH_38
HTH_31
UPF0758_N
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QVV68096
LinkDB
All DBs
Position
482983..483822
Genome browser
AA seq
279 aa
AA seq
DB search
MSDAFGDYLRNIGRIPLLTAQEEVHLGTIVKDWMESDAPSPVLQRRGRRALQRIVSANLR
LVVTVALRYIRRLKHLAHDPMDLVQAGNLGLLRAAEKYDPTRGYKFSTYGYWWIRQSINR
YLQEHSGSIRIPVNLVSLANRADAIQSLRTDPLSVEELAELLDETPERLLYAMAIQHRSN
TVSLDQQLNGSDGDMTLLDTVSDDHLPCIHDDYHWMHSQLEHLSTPELTVIQLRYGEDKQ
RSFAEVARLIGRSKDQVQRLERHALSKLRRHLTPALDPR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcctttggcgactatctgcgcaacattggccggatccctttgctcaccgcc
caggaggaggttcatctcggaacgattgtgaaagactggatggagagtgatgctccatca
cctgttctccagcgccgcggtcggcgtgccctgcaacggatcgtgagtgccaatcttcga
ttggtggtgacggtcgccctccgctatatccgccggctcaagcacctggcccatgacccc
atggatctggtgcaagctggcaatcttggtttgctgcgcgctgcggagaaatacgatccc
acccgcggttataaattttcaacctacggctactggtggattcgccagtcgatcaatcgc
tacctgcaggagcacagcggcagcatccgtattcctgtgaacctggtgagtctggccaat
cgagcagatgccatccagagcctccgcactgatcctctgagtgtggaagaattggcggag
ctgctggatgaaacaccggagcgactgctctatgccatggccattcagcatcgcagcaac
acggtgtcgcttgatcagcagctcaacggcagtgatggcgacatgaccttgctcgatacg
gtgagcgatgaccatctgccctgcatccacgacgactaccactggatgcatagccagctc
gagcatctttcaacgcccgagctcacggtgattcagttgcgctatggggaagacaaacag
cgctccttcgcggaggtcgcccgtctgattggtcgcagcaaggatcaggtgcagcggctc
gagcggcacgccctcagcaagttgcgccgccacctcacgcctgcattggatccgcgttga
DBGET
integrated database retrieval system
