Synechococcus sp. LA31: KJJ24_04220
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Entry
KJJ24_04220 CDS
T10468
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
synl Synechococcus sp. LA31
Brite
Enzymes [BR:
synl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KJJ24_04220
Transfer RNA biogenesis [BR:
synl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KJJ24_04220
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NCBI-ProteinID:
QVV69012
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Position
complement(788984..790942)
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AA seq
652 aa
AA seq
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MQGSKVRLRIGFDAKSSVVPQRQLELICPLPSGTDAPQRLGASPWALKPEDLNDAGLTRR
SWGATWLLLLESTETLEIRDFADLACGGTEPAQLASCWLKLVGPQQWFRFKQGQIQARSA
AELKPLRRDRRLKQLQEQRQQQWQQLLRARQPVSFDRLPPEQQQRLEALKQLAAGALELD
QLEPELRQSLTALHLAQDRGDLRHLLVDLGQWDRHHLVSMADTTWSLGFSAELEAEAERV
LALQDQELPGDSGRLDLTGQRCVTVDDDDTRDIDDGLALERRPDGSLRLWIHVADPGRLV
PVDSPLDLEARRRGSSLYLASGNLPMFPLALTTGPFSLRAGIRSAAWSTWVDLDAEGDIA
AYGIVRSWVKPTYRLSYSDADDLIDLAPPQERDLADLDQLLNRRRQWRVRQGALLMDLPE
GRIRSKGGEPVLEVSEPSPSRAMVAEAMILAGAIAARFGVEHGLALPFRSQLPAELPPKA
ELDALPDGAVRFAAIKRCLSRGLMGTQASPHFSLGLPAYAQATSPIRRYGDLVVQRQILA
QLSGDTPMGEDALQDLLNSFDGAVREGIGISREDQRHWQQVWFEAHKSSQWRADFLRWLR
PQDRLGLVRIDDLAMDLAAECPQNAQPGEALLLRVQQVDSLRDQLKLVASAS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
gtgcagggcagcaaagtgcgcttgcgcattggcttcgacgccaaatcatccgttgtgcct
cagcgtcagctggagctcatttgccccctgccctccggtaccgatgcaccgcagcggttg
ggggcttcgccttgggcgctcaagcccgaagacctgaacgacgcaggtctcacaaggcgc
agctggggcgcaacctggctcctgcttcttgaatcaaccgagacgcttgagattcgagat
tttgctgatctggcgtgtggcggcaccgagccagcccaattggcgagctgctggttgaag
cttgttgggcctcagcagtggtttcggttcaagcagggtcagatccaggcccgcagcgcc
gcagagctgaaaccgctgcgccgcgatcggcgtctcaaacagctgcaagagcaacgtcaa
cagcagtggcagcagttgctccgcgctcggcagcccgtgagtttcgatcgtttgccaccc
gagcagcagcagcggctcgaggccctgaagcaactggcggccggtgccttggagctcgat
caacttgaaccggagctgcgccagagcctcaccgctctccatctcgctcaggaccgcggc
gatctccgacatctcttggtggatctcggtcaatgggatcgccaccacttggtgtcgatg
gccgacaccacttggagcctcggtttcagtgcagagctcgaggccgaggccgaacgggtg
ctcgctttacaggatcaagagcttccgggcgactctggccgccttgatctcacgggccag
cgctgcgtcacggttgacgatgacgacacccgcgacatcgacgatggcctggccctagag
cgccggccagacggcagcctgaggttgtggattcatgtggccgatccaggtcgtttggtg
cccgtggattcgccgctcgatctggaggcgcgccgccgcggcagcagcctgtatctggcc
agcggaaacctaccaatgtttccgctggccctcaccacaggccccttcagcctgagggcc
ggtatccgcagtgccgcctggagcacctgggtggatctcgatgcggagggcgacatcgcg
gcctacggcatcgtgcgcagctgggtgaagcccacctaccggttgagctacagcgatgcc
gatgacttgatcgatctggcgccgccgcaagagcgcgatcttgccgatctcgatcagctg
ctgaatcgccgtcgccaatggcgagtccgccagggagcgctgctgatggatctcccggaa
gggcgcatccgcagcaaaggtggcgagcccgtgctcgaggtcagcgagcccagcccatcc
cgcgccatggtggctgaggcgatgatcctggctggtgcgatcgcagcgcggttcggcgtt
gagcatggcctagcgctgcccttccgcagccagttgccggccgagctgccaccgaaagca
gagctcgacgcgctgcccgatggtgccgtgcgctttgcggcgatcaagcgctgcctcagc
cgcgggttgatgggaacccaggcttcaccccacttcagcctcgggcttcctgcttacgcc
caggccacctcgccaatccggcgctacggcgatctggtggtgcagcgccagattctggct
cagctcagtggcgacactcccatgggcgaagacgcattacaggatctgctcaacagcttt
gatggagcagtgcgcgagggcatcggcatctcccgcgaagaccagcgccactggcagcag
gtgtggtttgaagcccacaaaagcagccaatggcgtgctgacttcctgcgctggcttcgt
ccccaagaccggctcggcctggtgcggatcgatgatctggccatggacctggcggctgaa
tgcccgcagaacgcccagccaggagaggcgttgctgctgcgtgttcaacaggtggactca
ctacgggatcagctcaagcttgtggcctcagccagctga
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