Synechococcus sp. LA31: KJJ24_06540
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Entry
KJJ24_06540 CDS
T10468
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
synl Synechococcus sp. LA31
Pathway
synl02010
ABC transporters
synl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KJJ24_06540
03070 Bacterial secretion system
KJJ24_06540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synl02000
]
KJJ24_06540
02044 Secretion system [BR:
synl02044
]
KJJ24_06540
Transporters [BR:
synl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KJJ24_06540
Secretion system [BR:
synl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KJJ24_06540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_22
cNMP_binding
AAA_16
SbcC_Walker_B
AAA_30
AAA_29
DUF3584
Motif
Other DBs
NCBI-ProteinID:
QVV68767
LinkDB
All DBs
Position
complement(1210770..1213655)
Genome browser
AA seq
961 aa
AA seq
DB search
MSTLNLSSMAPFDQLPADRLRVLQPQLQLRRCRLGQVLQAHEQAGLGMAVVLRGQLRVLG
VDPLQAGLRSLARLGPGEMAGWFGVLSGLSGEQLQVASAEAELIWIPAPVFLALLEEAPQ
LRVWFEEQLSPIELHLALVQELRADLAWRHWLEHGLELQQLARLGSPNGNRSLVWRPSVW
NGEQRLIGLPKPPALSDPPGETSVAKASASDAPLEEGSTPEPEAPDGFYALAPSMAAPSA
EAAANPLRVPQAVGPRLAPLAICEGVAEQLQVPFDREALLDQIDATLQQQDRLNLVNVGQ
LLSSMGLRVVMATLPLDRLARVQPPAVLAQEGQLGVLDGVDPDGLARVLDPELGPLRIPL
AELTAEDGELELLLLERTPISKSRRFSWGWFTPYVAEHRRELIEVFAASFVVNLLALATP
LGIQVLVDQVARFENFGALLSISALLFLASLVGAVVRTLRSLIFTDVANRVDQATKGSIL
DRLVRLPQGFFDSRPVGQVTYYFNQLDRLREFLIGQSLTTLVDFLFSLLYIVVLVALNPP
LTLVTLSTLPLIIILALVSNPIVESMIERSIGEAVKTYAFLTEAIGGIQTIKSQNAELKT
RWEFQTRYSRFIGEDFKLRVTNETVSSLANFINELNGILVVGFGIWFVMKGQLTLGAFFA
FRIISSYVTRPMVQLVQTWQQFKMSTEQIKMVGDIVDRQTEQSEEEATNIPMPPLKGDVA
FQGVSFRFDVDAPRVLHGIDLEVPAGTFVGLVGGSGSGKSTLLKLLPRFYKAEEGQVLID
GLDINKVELYSLRRQIGVVPQDSLLFDGTIRDNLLLVKPDASTDDLIRAARLACAHDFIM
AMPKGYSSSVGERGAGLSGGQRQRLALARAVLQNPRLLILDEATSALDARTERQVCLNLF
EAFRGRTVFFITHRLSTVRPADLIVLMDQGAIMERGSHSQLMQQRGWYYALHQSQNQEGL
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctcaacctcagctccatggccccgttcgatcagctgccggctgatcgtttg
cgggtgctgcaaccgcagctgcagctacgccgttgccggctcggccaggtgctgcaggcc
catgaacaagcagggctggggatggcggtggtgttgcgcggccagttgcgcgtgctcggt
gtggaccccttgcaggcggggctgcgcagcctggcgcgcctcggccccggcgagatggcg
ggttggtttggcgtgctgtcggggctgagcggtgaacagctgcaggtggcgtcagcggaa
gccgaactgatttggatcccagcgccggtgttcctggctctgttggaagaagcacctcag
ttgcgggtttggtttgaagagcagctgagtccgattgagttgcacctggcgttggtgcag
gagctgcgcgctgatctggcctggcgccattggctcgagcatgggctggagctgcagcag
ctagcccggctgggaagccctaatggcaatcgcagcctggtttggcgccccagtgtgtgg
aacggcgagcagcggctaatcggcctgccgaagcctcctgccctgtccgacccgccaggg
gagacgtccgttgcaaaagcgtccgcttctgacgcgcctctggaggagggatcgacacct
gagcccgaggccccagacggcttttatgcgctcgccccctccatggcagctccgagtgcc
gaggcggccgccaatcccctgcgggtgccccaggccgtggggccgcgcttggcgccgctg
gccatctgtgaaggcgttgccgagcagttgcaggtgccgttcgatcgcgaagcgctgctc
gatcagatcgacgccaccctgcagcagcaggaccgcctcaacctggtgaacgtgggccag
ctgctcagctccatggggctgcgggtggtgatggccacgctgccgctcgatcgcctggcg
cgggtgcagccgccggccgtgcttgcccaggaggggcaactaggcgtgctcgatggggtt
gatcccgatggtttggcccgggtgctcgatccggagctggggccgctgcggatccccctg
gcggagctcaccgctgaagacggtgaactggagctgctgttgcttgagcgcacgccgatc
agtaagagccgccgcttcagctggggctggttcacgccctatgtggccgagcatcggcgc
gagctgattgaggtgtttgccgcctcgtttgtggtgaacctgctggccctagccacgccc
ctggggatccaggtgctggtggatcaggtggcccgctttgaaaatttcggggcgctgttg
agcatctcggcgctgctgtttctggcatcgctggtgggggcggtggtgcgcacgctgcgc
agcttgatcttcacggatgtggccaatcgggtggatcaggccaccaagggctccatcctc
gatcgcttggtgcggctgccccagggcttcttcgatagccgcccggtgggccaggtgacg
tactacttcaaccagctggaccggttgcgggagtttctgatcggccagagcctcaccacc
ttggtggattttctgttttcgctgctctacatcgtggtgctggtggcgttgaatccgccg
ctcacgttggtgacgctctccaccctgccgttgatcatcatcctggcgctggtcagcaat
ccgattgtggagagcatgatcgagcgctcgattggcgaggcggtgaaaacctatgccttc
ctcaccgaagcgattggcggcatccaaacgatcaaatcccagaatgccgagctgaaaacc
cgttgggaatttcagacccgctacagccgcttcatcggcgaagacttcaagcttcgcgtt
accaatgaaacggtgtcgtcgctggccaatttcatcaatgagcttaacggcattttggtg
gtgggctttggtatctggtttgtgatgaagggccagctcaccttgggcgcattctttgcg
ttccggatcattagcagttatgtgacccggccgatggtgcagttggtgcagacctggcag
cagttcaagatgagcaccgagcagatcaagatggtgggcgacatcgtggatcgccaaacc
gagcagagcgaggaagaagccaccaatatcccgatgccaccgcttaaaggcgatgtggct
ttccagggggtgagcttccgctttgatgtggatgcaccgcgggtgctgcatggcattgac
ctggaggtgccagcgggcacctttgtgggcctggtggggggatcaggcagcggcaagagc
accctgctcaagctattgccgcgtttctacaaagcggaagaaggccaggtgctgatcgat
gggctggatatcaacaaggtggagctctattccctgcgccgtcagatcggtgtggtgcca
caagacagccttctctttgatggcaccatccgcgacaacttgctgctggtgaaacccgat
gccagcaccgatgatttgattcgcgccgctcgccttgcctgcgcccacgacttcatcatg
gcaatgcccaagggctacagctccagcgtgggtgagcggggcgccgggctctcgggcggt
cagcgccagcgcctggccctggccagggccgtgctgcaaaacccgcgcttgctgatcctc
gatgaggccaccagtgccctcgatgcgcgcacggaacgccaggtgtgcctcaacttgttt
gaggcgttccggggccgcacggtgtttttcatcacccaccggctctccaccgtgcggccg
gcggacctgatcgtgttgatggatcagggcgcgatcatggagcgcggcagccacagccag
ctgatgcagcaacgcggctggtactacgcactccatcagagccaaaaccaggagggcctg
agctag
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