Synechococcus sp. LA31: KJJ24_06900
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Entry
KJJ24_06900 CDS
T10468
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
synl Synechococcus sp. LA31
Pathway
synl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KJJ24_06900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synl03400
]
KJJ24_06900
Enzymes [BR:
synl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KJJ24_06900
DNA repair and recombination proteins [BR:
synl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KJJ24_06900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QVV68827
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All DBs
Position
1273555..1277181
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AA seq
1208 aa
AA seq
DB search
MSLARFDANAMPLSPGIRLLEASAGTGKTFALAHLVLRLLSEGAQPLVVEQLLVVTFTDA
AAAELRDRIARRLQEALHMLEPGSTASPGDAPLAAWREALGPTPPALLRGRLLLALEQLD
RADITTIHGFCRRTLQRQALEAGLGPAVSLESEGRERRAELVHDYWRQQVLPLSAGLLAG
LRQRHVSPEQLVRLLGSLDGDPALSLEPLPEPLSHDTAFAPQLEALWPQLWHHFHQQWHA
CSEALEADLAAAAAELKSLALPYKPYRLKPKPDKLQRVQAWLDGLGDAATPPSYQEVLSQ
GDLLGYFHPGSFCKVAAAAHGDGVSLPQRPLLEAIAALIDGPAELLLLHFAHWGRRELAR
RRERSGQMGFGQLLEQLDPGANPGGASPLLEAVAGRYRAALIDEFQDTDPLQWRILERAF
AGTEPGHLLVMVGDPKQAIYRFRGGELATYRQAGSTANDRFGLTDNRRSSADLVAGLNAL
MQPGLVRSDLEVPAVQAKANKGELLLPAEEPPLQLLPVEPAELESRVAALCQGLLERRLV
LRQRDQQRVLQPGDLCLLVGRHSQAESLRAALERRQLPSRLVSRGDVFESLGATALQRLL
DALANPGDPGRQRLLAASALLGWSAAELKGSPPERWDQLGGELSGWAQQLPRLGLTGVLA
ELLGTEGLARLSLRGRALADLQQAAELVQEQMHSQGLSAVAAADWLRNLRLQEERDPPDE
HLCRSDAAQSAIAVVTVHRSKGLEYPVVICPYLWKAPAPPKAGSQRLGRRWLPPGHNQPR
LDLHLNPHWGSGRAAAAQDHNAQLQEAERLAYVACTRAQHLLVLAWPGPDQAEAGNPLSP
WLEERELSALHTIDPTTLPPLDPPWRPDPERGALQLGPTPSRPLDSRWGRASYSAWAHAG
SALPPQAADEGRDSDALSPSDDSSAETPPLEPNAWPALGPLAHFPRGAGPGDALHRMLEQ
IDFPQLAAEPDTFRPLLLQELDRAGLEPELVEPLLQGLHQLVRCPLGGALGACRLADLAS
GSWLSELNFDLPLAHTESQRLVRSSGLAAAFAQQPGGRFGASYGEQLRGLQVASRGFLTG
SIDLVFQWQQRWWVADWKSNWLGRKGSQGEVVACGPADYNQTAMAELMARSHYPLQAHLY
LVALHRYLLWRLPGYNPTEHLGGYAYVFLRGVPAAVEAPEAGVPGVLVDNPPLERLFALD
ALLRDGQP
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggcccgcttcgatgccaacgccatgcccctcagcccgggcattcgcctgctg
gaggccagcgctggcaccggcaaaacctttgctctggcccatctggtgctgcggctgctc
agcgagggggcccagcctttggtggtggagcagctgttggtggtcaccttcaccgatgca
gcggcggcggaattgcgcgatcgcatcgcccggcgcctgcaggaggccctgcacatgctc
gagccgggcagcaccgccagccccggcgatgcaccgctcgcggcctggcgggaggccctg
ggccccacaccaccggcgctgctgcgggggcgcttgctgctggccctcgagcagctcgat
cgcgccgatatcaccaccatccatggcttctgccggcgcaccttgcagcgccaagccctc
gaagcgggcctggggccagcggtgagcctcgagagcgaaggccgcgagcgccgcgccgag
ctggtgcacgactactggcgccaacaggtgctgcccctgagcgcgggcttactggcgggc
ttgcgtcagcgccacgtgagccccgagcagctggtgcggctgctcggcagccttgacggc
gatccggccctcagcctcgagcccctgcccgagccgctcagccacgacacggctttcgcc
ccgcagctcgaggcgctctggccgcagctctggcaccactttcatcagcagtggcacgcg
tgcagcgaagcgctggaggccgacctggccgccgcggccgcggagctcaagagcctggct
ctgccctacaagccctaccggctcaaacccaagcccgacaagctgcagcgggtgcaggcc
tggctcgatgggctgggcgatgccgcaacgccccccagctaccaagaggtgctcagccag
ggggatctgctcggctacttccaccccggcagcttctgcaaggtggccgccgccgcccat
ggtgatggcgtgtcgctgccgcagcggccactgctggaggcgatcgccgcgctgatcgac
gggccagccgaactcctgctgctgcacttcgcccactggggccgccgcgagctggcccgc
cggcgggagcgcagcggccagatgggcttcggccagctgctcgagcagctcgatccgggc
gccaaccctggcggcgcctccccattgctggaggcggtagccgggcggtaccgcgccgcc
ttgatcgatgagtttcaagacaccgatcccctgcaatggcgcatcctcgagcgggccttc
gctggcaccgagcccggccacctgctggtgatggtgggcgatccgaagcaggcgatctac
cgcttccgcggcggcgagcttgccacctatcgccaggccggcagcaccgccaacgaccgc
tttggcctcaccgacaaccgccgctccagcgccgatctggtggcggggctcaatgccctg
atgcagcccgggctggtgcgctcagacctggaggtgcccgccgtgcaggccaaggccaac
aaaggcgagctgctcctgccggctgaagagccaccgctgcaactgctgccggtggagccc
gcggagctggagagccgggtggccgcgctgtgccaggggctactggagcggcggcttgtg
ctgcgccagcgggatcagcaacgggtgttgcaaccgggagatctctgcttgctggtgggg
cgccacagccaggccgaaagcctgcgggcggcattagagcggcgccagctgcccagccgc
ctggtgagccgcggtgatgtgttcgaaagcctcggtgccaccgccctgcagcggttgctc
gatgccctggccaacccgggcgatcccggccgccagcggctgttagcggcctcagcgctg
ctcggttggtcggcggctgagctcaagggcagcccgcctgaacgctgggatcagctgggg
ggcgagctcagcggctgggcgcagcaactgccgcggctggggctcaccggcgtgctcgcc
gagctgctcggcaccgaagggctggcacggctctccctgcgggggcgggccttggcggat
ctgcaacaagcggccgagctggtgcaggagcagatgcacagccaggggctcagcgccgtg
gccgcagccgattggttgcgcaacctgcggctgcaggaagagcgcgatccccccgatgag
cacctctgccgcagcgatgccgcccaatcggcgatcgccgtggtgacggtgcaccgcagc
aaaggcctggaatatcccgtggtgatctgcccttacctgtggaaggccccggccccgccc
aaggcgggcagccagcggctggggcggcgctggctgccgccagggcacaaccaaccccgc
ctggatctgcacctcaacccccactggggcagcggccgcgccgccgccgctcaagatcac
aacgcccagctgcaggaggccgagcggctggcctatgtggcctgcacccgcgcccaacat
ctgctggtgctcgcctggccgggcccggatcaggccgaagcgggcaatcccttgagccca
tggctggaggagcgcgagctcagtgcgctgcacaccatcgatcccaccaccctgccgccg
ctggatcccccctggcggccggatccagaacggggcgccctccagctgggccccaccccc
agccgcccgctcgacagccgctggggccgcgccagctactccgcctgggcccatgccggc
tccgccctgccgccccaggccgccgatgaaggccgcgacagcgatgcgctcagccccagc
gatgacagcagcgctgaaaccccgccgctcgagccaaatgcatggccagccctcggcccc
ctggcccacttcccccgcggtgcaggccctggcgatgcgctgcaccgcatgctcgagcag
atcgatttcccgcagctagccgctgagccggataccttccgcccgctgctcctgcaggag
ctggatcgcgccggcctggagccagagctggtggagccgctgctgcaggggctccaccag
ctggtgcgctgccccctcggcggtgccctgggggcctgccgcttggcggatctggccagc
ggcagctggctgagcgagctcaatttcgatctaccgctggcccacaccgagagccagcgg
ctggtgcgcagcagcggcctggccgccgccttcgcacagcagcccggcggccgtttcggt
gccagctacggcgagcaactgcgcggcctgcaggtggccagccgcggtttcctcaccggc
tcgatcgatctggtgttccagtggcagcagcgctggtgggtggccgattggaagagcaat
tggctaggccgcaaaggcagccagggcgaggtggtggcctgcggccccgccgattacaac
caaaccgcgatggcggagctgatggcccgcagccactaccccctgcaagcgcacctttat
ctggtggcgctacatcgctacctgctctggcggctgcccggctacaaccccactgagcac
ctggggggctacgcctacgtgtttctgcgcggtgtgccggcagcggtggaggcgccagag
gccggcgtacctggcgtgctggtcgacaacccaccgctggagcgcctattcgccctggac
gctctgctgcgggatggccaaccatga
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