Synechococcus sp. LA31: KJJ24_06905
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Entry
KJJ24_06905 CDS
T10468
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
synl Synechococcus sp. LA31
Pathway
synl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KJJ24_06905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synl03400
]
KJJ24_06905
Enzymes [BR:
synl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KJJ24_06905
DNA repair and recombination proteins [BR:
synl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KJJ24_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
nSTAND3
SH3_13
nSTAND1
IstB_IS21
AAA_28
DEAD
FtsK_SpoIIIE
PhoH
AAA_5
AAA
SLFN-g3_helicase
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QVV68828
LinkDB
All DBs
Position
1277178..1278794
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AA seq
538 aa
AA seq
DB search
MSSLAAALADTLQRRLPASAEADLQLLKPLIEALFAALEQGELGLDLKAEAPDGLDQSHW
PDHYLTALKASGWLVQADALRANTEVEALIVQEGRWLRWRRWQEQLSLCLDQLIHRAQAP
LPQTHTSAAIHRAIAAASAGLDGTQQEAVAALLQHPLVVLLGGPGTGKTSTVARMLAAAL
ALEPQLRVQLAAPTGKAAARLSAALAKRPSLPCSTLHRLLEARGGSRFARQAANPLELDL
LVVDELSMVDLPLMAALLEAMPPQGRLLLVGDAGQLPPVGTGAVLEELCRPAVRAQLGSA
VVELTTTYRNNGAIAAIAAAARDQPTRSADPLQGLRPLLHGLEANANVRWLECPLQQLPK
AVLTPLRQHQQQLQELSLALQWHGSDGEPGGAAALLAELEQLIALSPVRQGPWGVQALHR
ALLGPAATGPLERWPLGTPVLNRLNRPEQELANGDIGVVVEREGQRLVLMAGGRLLHPAR
LAGAEPALALTVHKAQGSQYGQVLLLVPPSRHADPRLLYTGLTRARQQLLLVSPSQAA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctggccgcggccctggccgacaccctgcagcggcggctacccgccagcgcc
gaggcagatctccagctgctcaagcccctgatcgaggcgctgttcgcggccttggagcaa
ggggagctgggcctcgatctcaaggctgaagcaccagacgggctggatcagagccactgg
ccggatcactacctcacggccctcaaggcaagcggctggctggtgcaggccgatgccctt
cgcgccaacaccgaggtggaggcactgatcgtgcaggagggccgctggctgcgctggcgg
cgctggcaggagcagctgagcctctgcctcgatcagctgatccaccgggcccaggccccg
ctgccgcaaacccacaccagcgccgcgatccaccgggccatcgccgcggccagtgccggg
ctcgatggcacacaacaagaggctgtggcagccctgctgcagcaccccctggtggtgctg
ctcggcggccctggcaccggcaaaacctccaccgtggcgcgcatgttggcggccgcgctg
gccctcgaaccccagttgcgggtgcagctggccgcccccaccggcaaggccgccgcgcgc
ctcagcgctgccctggccaagcggccgtccctgccgtgctccaccctgcaccgcctgctc
gaggcccgcggcggcagccgctttgcccgccaggccgccaaccccctggagctcgatctc
ctggtggtggatgagctctcgatggtcgacctgcccctgatggcggccttgctggaggcc
atgcccccccaggggcgtctgctgctggtgggcgatgcgggccagttgccgccggtgggc
accggcgccgtgctcgaagagctctgccgcccggcggtgcgggcgcagctgggctctgcg
gtggtggaactcaccaccacttaccgcaacaacggcgccatcgccgccatcgcggccgcc
gcacgcgatcagcccacccgcagcgccgatccgctgcaggggttgcggccgctgctgcac
ggcctcgaggccaacgccaacgtgcgctggctcgaatgccccctgcaacagctgcccaag
gcggtgctcactcccctgcggcagcaccaacaacagctgcaggagctgagcttggcgttg
cagtggcacggcagcgacggggagcctggcggcgcagcggccttactggcggagctggag
cagctgatcgccctgagccccgtgcgccaggggccctggggcgtgcaggccctgcaccgc
gccctgcttggccctgcggcgaccgggccgctggagcgctggcccctcggcaccccagtg
ctcaaccgactgaaccggcccgagcaggagctcgccaatggcgacatcggcgtggtggtg
gagcgcgagggccagcggctggtgttgatggcgggggggcggctgctgcatcccgcccgg
ctggcgggggccgaaccggccctggccctcaccgtgcacaaagcccagggcagccaatac
ggccaggtgttgttgctggtgccccccagccgccacgccgatccacgcctgctctacaca
ggcctcacccgggcccggcagcagctgctactggtcagccccagccaggctgcctag
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