Synechococcus sp. LA31: KJJ24_08270
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Entry
KJJ24_08270 CDS
T10468
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
synl Synechococcus sp. LA31
Pathway
synl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJJ24_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synl03019
]
KJJ24_08270
03016 Transfer RNA biogenesis [BR:
synl03016
]
KJJ24_08270
Enzymes [BR:
synl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KJJ24_08270
Messenger RNA biogenesis [BR:
synl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KJJ24_08270
Transfer RNA biogenesis [BR:
synl03016
]
Prokaryotic type
tRNA degradation factors
KJJ24_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
PCB_OB
OB_RRP5_4th
KH_KhpA-B
DUF3586
KH_2
Motif
Other DBs
NCBI-ProteinID:
QVV66521
LinkDB
All DBs
Position
1529963..1532107
Genome browser
AA seq
714 aa
AA seq
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MQGHTQSISFDGREIRLTTGRFAPQAGGSVMVECGDTAVLVTATRSGGREGIDFLPLICD
YEERLYAAGRIPGSFMRRESRPPERATLIARLIDRPMRPLFPSWLRDDLQIVATCMSLDE
RVPPDVLAVTGASLATLLAKIPFNGPMAAVRVGLLGDDFVLNPSYREIERSELDLVVAGT
PQGVIMVEAGANQLPEQDVIEAIDFGYEAVCELIKAQQALLKELGIEQVFPEAKTADDTL
PKFLEKECAKGIGDVLKQFSLTKAERDEQLDGIKAKAAESIAALKDDDAIKVAVSSSGKA
LGNSYKALTKKLMREQIVKDGKRVDGRNLDEVRPISAAAGVLPKRVHGSGLFQRGLTQVL
SCATLGTPSDAQEMDDLNPSNEKTYLHHYNFPPYSTGETKPMRSPGRREIGHGALAERAL
IPVLPSKESFPYVLRVVSECLSSNGSTSMGSVCGSTLALMDAGVPLKAPVSGAAMGLIKE
GSEVRILTDIQGIEDFLGDMDFKVAGTEKGITALQMDMKITGLEVKTVAEAINQARPARL
HILEKMLSAIEKPRDVLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
GGIVTIASHDGAAAEEAQRIIEGLTRRVSEGEVFSGAVTRVIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVRVGDHVTVRVREIDNRGRINLTLRGVPQAEEPAAEAPAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggtcacactcagtcgatctccttcgatggtcgggagatccggctgaccaccggc
cgcttcgctccccaggcaggcggttcagtgatggtcgaatgcggagatacagccgttctg
gtcaccgccacccgctccggcggtcgtgaaggcatcgatttccttcccctcatctgcgat
tacgaagagcgcctctacgccgctggccgcatccccggcagcttcatgcgtcgggaaagc
cgcccccccgagcgcgccaccttgattgcgcgtctgatcgaccgcccaatgcggccgctc
ttccccagctggctgcgcgacgaccttcagatcgtggctacctgcatgtcgcttgatgag
cgcgtgccgcccgatgtgctcgccgtcaccggcgcctccctggccaccctgctggcaaaa
attcccttcaacggtccgatggccgccgtgcgggtgggtctgctgggcgacgacttcgtg
ctgaaccccagctatcgcgagatcgagcgctccgagcttgacctagtggttgctggcacg
ccccagggcgtgatcatggtggaggccggcgccaaccagctgcccgagcaggatgtgatc
gaagcgatcgacttcggctacgaagcggtgtgcgaactgatcaaggctcagcaagccctg
ctcaaggagctgggcatcgagcaggtgttccccgaagccaagaccgcagacgacaccctg
cccaagttcctggagaaggaatgcgccaagggcatcggcgatgtgctcaagcaattcagc
ctcaccaaggccgaacgcgatgagcagctcgatgggatcaaggccaaggcggccgaatcc
atcgcagccctcaaagacgacgacgccatcaaggtggcggtgagcagcagcggcaaggcc
ctgggcaacagctacaaggcgctcaccaagaagctgatgcgcgagcagatcgtgaaggat
ggcaagcgcgtggacggccgcaacctcgatgaggtgcgcccgatcagcgccgcagctggt
gtgctgcccaagcgcgtacacggttcaggcttgttccagcgcggcctcacccaggtgctc
tcctgcgccaccctcggcaccccgagcgacgctcaggaaatggacgacctcaacccgtcc
aatgagaagacctacctgcaccactacaacttcccgccttactccaccggcgagaccaag
cccatgcgcagcccgggccgccgcgaaatcggccacggcgccctggcggagcgggccctg
atcccggtgctgcccagcaaggagagcttcccctacgtgctgcgggtggtgtcggagtgc
ctgagttccaacggctccacctcgatgggttccgtgtgcggcagcaccctggccctgatg
gatgccggcgtgcccctcaaggcgcctgtgagcggcgccgccatgggcctgatcaaggaa
ggctctgaggtgcggatcctcactgatatccagggcatcgaggacttcctcggcgacatg
gacttcaaggtggccggcaccgagaagggcatcaccgccctgcagatggacatgaagatc
accggccttgaggtgaaaaccgtggccgaggcgatcaaccaggcccgccccgcccgcctg
cacatcctcgagaagatgctctcggcgatcgagaagccccgcgacgtgctgagcccccat
gctccgcgcctgctcagcttccgcatcgaccccgaactaatcggcaccgtgatcggccct
ggcggccgcacgatcaagggcatcaccgagcgcaccaacaccaagatcgacatcgaagac
ggcggcatcgtgacgatcgccagccacgacggtgctgccgctgaggaagcgcaacgcatc
atcgaaggcctcacccgccgcgtgtcggaaggcgaggtgttcagcggtgcggtgacccgc
gtgatcccgatcggcgcctttgtggagatcctgcctggcaaggaagggatgatccacatc
tcgcagctgagcgaagcgcgcgtggagaaagtggaagatgtggtgcgcgtgggcgatcac
gtcaccgtgcgcgtgcgcgagatcgacaatcgcggccgcatcaacctcaccctgcgcggc
gtgccccaagccgaagagccggcagcagaagcacccgccgagtga
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