Synechococcus sp. LA31: KJJ24_11580
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Entry
KJJ24_11580 CDS
T10468
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
synl Synechococcus sp. LA31
Pathway
synl03030
DNA replication
synl03430
Mismatch repair
synl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJJ24_11580 (holA)
03430 Mismatch repair
KJJ24_11580 (holA)
03440 Homologous recombination
KJJ24_11580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synl03032
]
KJJ24_11580 (holA)
03400 DNA repair and recombination proteins [BR:
synl03400
]
KJJ24_11580 (holA)
Enzymes [BR:
synl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJJ24_11580 (holA)
DNA replication proteins [BR:
synl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJJ24_11580 (holA)
DNA repair and recombination proteins [BR:
synl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJJ24_11580 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
QVV67086
LinkDB
All DBs
Position
2117552..2118553
Genome browser
AA seq
333 aa
AA seq
DB search
MPIHLLWGDDEAARTRAVETLISHHTDPAWQSINLARLDGNEAGQAAQALGEARTPPFGG
GDRVVVLQRSPFCNQCPAELAEQLEAALPLIPASCHLLLVNSGKPDARLRTTKALQKLVK
AGEAREQSFQLPAVWDGAGQIDLVQRTARELGLQLEPAAAEALSDAIGSDSARLASELEK
LALYVGAETGSQALQPPITAAAVAALVGSQATNALQVGDALLAGNPAEAVALVDALLAAN
EPALRIVATLCGQIRGWLWVSLLDQQGDNDVNAIAKAAGIGNPKRIYVMRKQIRGRKPAR
FLALLRQLLEVEAALKRGGNPGDAFRDGFLLTS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatccatctgctctggggcgacgacgaagcggcccgcacgcgggcggtggagacg
ttgatcagccaccacaccgatccggcctggcagagcatcaacctggcccggctcgatggc
aacgaagcgggccaggccgctcaggccctgggggaggcccgcacgccgcccttcggggga
ggggatcgggtggtggtgttgcagcgcagccccttctgcaaccagtgcccggcggagctg
gcggagcaactggaggcagccctgcccctgatccccgccagctgccacctgctgctggtg
aacagcggcaagcccgatgctcgcctgcgcaccaccaaagccctgcagaagctggtgaag
gcgggcgaagcgcgcgagcagagcttccagctgccggcggtgtgggatggcgccggccag
atcgacctggtgcagcgcacggcccgggagctggggctgcagctggaacccgccgccgcc
gaagccctcagcgacgccatcggcagcgacagtgcccgactggccagcgaactggagaag
ctggccctctacgtgggggcagagacaggcagccaggccctccaaccaccgatcaccgct
gcggccgtggctgccctcgtgggcagccaggccaccaatgccctgcaggtgggtgacgcc
ctgctcgcgggcaaccccgccgaagccgtggcgctggtggatgccctgctggccgccaac
gaaccggcactgcgcatcgtggccaccctctgcgggcagatccgcggctggttgtgggtg
agcctgctggatcagcaaggcgataacgatgtcaacgccatcgccaaagccgccggcatc
ggcaaccccaaacgcatctatgtgatgcgcaaacagatccgcggccgcaaacccgcgcgc
tttctggcgctgctgcgccagctgctggaggtagaagccgcccttaagcgcggcggcaat
ccaggcgatgccttccgcgatggtttcctgctcacgagctga
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