Synechococcus sp. LA31: KJJ24_12710
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Entry
KJJ24_12710 CDS
T10468
Name
(GenBank) DEAD/DEAH box helicase
Organism
synl Synechococcus sp. LA31
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QVV67276
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Position
complement(2343945..2347076)
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AA seq
1043 aa
AA seq
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MSLLHATWLPVVPQGSFAKGKAPSAGLFIWADTWRVAEPVSPSGEAPLHPLSLNLDDLAT
WLDDNQFWSEDLRQAAITLTLPSRQQLSRGQKSSAAAAWSGLPMQAGEPLPKDLTWWPWQ
LEGWFLKPGPAAEWLNQLPLSGTEAAGLGDDLLWWCHLQRWCLSLIARGRWLPGTADDKA
SWLPLLNREDDRRRLEELALRMPQVVAASSADTHLACGRPRSNRLLVASIVEKLVDGQLR
AAFAPGGEGLDPLLEAWQEGLSSHDGKLQLDEEDQERLAIASHHWRETVAGKVAPARACL
ELFTPPEGEELWELRFGLQAEADPSLRVPAGIVWGAGDGNLALGEIQLEQPGALLLEGLG
RALLAFEPIERGLDAATPEAMQLTPAEAFVLVRTAASRLRDVGVGVVLPASLSGGLASRL
GLAITAELPEKSRGFTLGETLEWRWEFMIGGVTLNLRDLEKLAAKRSPLVQHKGAWIELR
PLDLKNAEKFCAAEPPFSLDDALRITGNEGETLQRLPVHAFTAGPRLQAVLEQYHQQKAP
DPLPAPPGFAGQLRPYQERGLGWLAFLHRFDQGACLADDMGLGKTIQLLAFLQHLKAEQE
LKRPVLLVAPTSVLTNWKREAAAFTPDLVVNEHYGPRRPNSPEAIKKALKGVDLVLTTYG
LLQRDSELLEAIDWQGMVIDEAQAIKNHNAKQSMAARDLGRPGRGSKCGPRFRIALTGTP
VENRVSELWALMDFLNPKVLGDEPFFRQRYRLPIERYGDMSSLRDLKSRVSPFILRRLKT
DKSIISDLPEKVELSEWVGLAPEQKKLYNQTVEESLDAIARAPLGQKHGQVLALLTKLKQ
ICNHPALALKQDPDPSDVGFFKEFAARSAKVQRLEEILEEVIEAGDRALLFTQFAEWGHL
LKAHLEQKWKQPVPFLYGNTSKAERQAMVDRFQDDPRGPQLFLLSLKAGGVGLNLTRASH
VFHIDRWWNPAVENQATDRAYRIGQQNRVMVHKFITSGSVEERIDRMIKEKSKLAEDIVG
SGEDWLGGMDVRQLKDLVTLSED
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcatgccacctggctgcccgtcgttccgcagggcagcttcgccaagggc
aaggccccaagcgcgggcctgttcatctgggcggacacctggcgcgtagctgaaccggtg
agccccagcggcgaagcgccgttgcaccccctcagcctcaacctcgacgacctggccacc
tggctggacgacaaccagttctggtcggaagacctgcgccaagccgccatcaccctcacc
ctgcccagccgccagcagctcagccgcggccagaagagcagtgccgccgccgcctggagc
ggcctgccgatgcaagccggtgagcccctgcccaaagacctcacctggtggccctggcag
ctggagggttggttccttaagcccggccctgcggccgaatggctcaatcagctgccactg
tccggcaccgaggcggccggcctcggcgatgacctgctgtggtggtgccacctccagcgc
tggtgcctaagcctgatcgcccgcggccgctggctgcccggtaccgccgatgacaaggcc
agctggctgcccctgctcaaccgcgaagacgatcgccgccgcctcgaagaactggccctg
cgcatgccccaggtggtagccgcctcaagcgccgacacccatctggcctgcggccgcccc
cgctccaaccgtttgctggtggccagcatcgtggagaagctggtggatggccagctgcgg
gccgccttcgcccctggcggcgagggccttgatccgctgctggaggcctggcaggagggg
ctgtccagccacgacggcaagctccagctggatgaggaagaccaggagcgcctggccatc
gccagccaccactggcgcgaaaccgtggccggcaaggtggcgccggcccgagcctgcctg
gagctgttcaccccgcccgagggggaggagctttgggaactgcgcttcgggctgcaggcc
gaggccgaccccagcctgcgggtgcccgccggcatcgtctggggtgctggcgacggcaat
ctggccctgggtgaaattcaactggagcaacccggggcgttgctgctggaaggtctgggc
cgagcgctgctggcgtttgagccgatcgagcggggcctcgatgccgccacccccgaagcg
atgcaactcaccccggcggaggccttcgtgctggtgcgcaccgccgccagccgcctgcgg
gatgtgggcgtgggcgtggtgctgcccgccagcctctcgggcggcctggcctcgcgcctg
ggcctggcgatcaccgccgagctacccgaaaaatcccgcggcttcaccctcggcgaaacg
ctcgagtggcgctgggagttcatgatcggcggcgtcaccctcaacctgcgcgatctggag
aagctggcggcgaagcgcagcccactggtgcagcacaagggcgcctggatcgagctgagg
ccccttgatctcaaaaacgccgaaaagttttgcgccgccgagccccccttcagcctcgac
gacgccctgcgcatcaccggcaacgaaggcgaaaccctgcagcgcctgcccgtgcatgcc
ttcaccgcaggcccacggctgcaggcggtgctcgagcagtaccaccagcagaaagccccc
gaccccctgccggccccgcctggcttcgccggccagctgcgcccgtatcaagagcgcggt
ctgggctggctcgccttcctgcatcgcttcgatcagggcgcctgcctggccgacgacatg
ggtctgggcaaaacgattcagctgctcgccttcctgcaacatctcaaggccgagcaagag
ttgaagcggccggtgctgcttgtggcgcccacctcggtgctcaccaactggaagcgggag
gcagcagcgttcacccccgatctggtggtgaacgagcactacggcccgcgccggcccaac
agccccgaagcgatcaagaaagcgctcaagggcgtggacctggtgctcaccacctacggc
ctgctccagcgcgacagcgaactgctcgaagcgatcgactggcagggcatggtgatcgat
gaagcccaagcgatcaagaaccacaacgccaaacaatcgatggcagcgcgggatctgggc
cgccccgggcgaggcagcaaatgcggcccccgcttccgcatcgccctcaccggcacgccg
gtggaaaaccgcgtcagcgaactgtgggcactgatggatttcctcaatcccaaggtgctc
ggcgatgaacccttcttccgccagcgctaccggctgccgatcgagcgctatggcgatatg
tcgtcgctgcgcgacctcaagagccgggtgagccccttcatcctgcggcgcctgaaaacc
gacaaatcaatcatttccgacctgccggagaaggtggagctgagcgaatgggtggggctc
gcccccgagcaaaaaaagctctacaaccaaaccgtggaggagagcctcgatgcgatcgcc
cgggctccactggggcaaaagcacggccaggtgctggcgctgctcaccaagctcaagcag
atctgcaaccacccagccctggccctcaagcaggatcccgaccccagcgatgtgggcttc
ttcaaggagttcgccgcccgcagcgccaaggtgcagcgccttgaagagattctcgaagaa
gtgatcgaagcaggcgatcgcgccctgctgttcacccaattcgccgaatggggccatctg
ctcaaggcccacctcgagcagaagtggaagcagccagtgccgttcttgtacggcaacacc
agcaaggccgaacgccaggcgatggtggaccgcttccaagacgatccccgcggcccgcag
ctgttcctgctgtcgctcaaggctggcggcgtgggcctcaacctcacccgcgccagccac
gtgttccacatcgatcgctggtggaacccggccgtggaaaaccaggccaccgaccgtgcc
taccggatcggccagcagaaccgcgtgatggtgcacaagttcatcaccagcggttcggtg
gaggagcgcatcgaccggatgatcaaggagaagtcgaaactggccgaagacatcgtgggc
tccggcgaagactggctcggcggcatggacgtgcgccagctcaaggacctggtgaccctc
agcgaggactga
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