Synechococcus sp. LA31: KJJ24_13750
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Entry
KJJ24_13750 CDS
T10468
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
synl Synechococcus sp. LA31
Pathway
synl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
synl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJJ24_13750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synl03400
]
KJJ24_13750
Enzymes [BR:
synl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KJJ24_13750
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KJJ24_13750
DNA repair and recombination proteins [BR:
synl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KJJ24_13750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QVV67455
LinkDB
All DBs
Position
complement(2544674..2545522)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLELQVVGFEIARVEVLRARAIASPPLPELFCSALEGCRVKAWLRRGK
YLMAQLERDNSDGGYWGVHLRMTGQFLWMSQPQEPCRHTRVRFWNLQEQELRFVDTRSFG
EMWWVPPGERPETVITGLQKLGPEPFSPAFNPTYLAERLAGSKRPIKTALLDQGLVAGVG
NIYADESLFMSRISPHIPCNRLRPPQLERLHAAVVEVLTTSIGAGGTTFSDFRDLTGTNG
NYGHAAWVYRRSGEPCRVCGSPIQRDKLSGRSSHWCPNCQGG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcctgaagttgagacggtgcggcgggggcttgagctccaggtggtgggc
tttgagatcgcgcgggtggaggtgcttcgggcccgtgcgatcgcgtccccaccgctgccg
gagctgttctgcagcgccctcgaaggctgccgagtgaaggcctggctgcggcggggcaaa
tatctgatggcccagctggaacgcgacaacagcgatggcggctattggggtgtgcaccta
cgcatgaccggtcaattcctctggatgagccagcctcaggagccctgccgtcacacccgg
gtgcgcttctggaatctgcaggagcaggagctgcgctttgtggatacccgtagcttcgga
gagatgtggtgggtccccccgggcgagaggcctgaaacggtgataaccggcctgcaaaaa
ctggggcccgaacccttcagccccgcctttaaccccacttacctggccgagcggctggct
ggctccaagcgtccgatcaaaacagcactgctcgatcaagggctggtggctggcgtgggc
aacatctacgccgatgaatcgctgttcatgagccggatcagcccgcacatcccctgcaac
cgactccgccctccacaactcgaacgactgcacgccgccgtggtggaggttctcaccacc
agcattggcgccggcggcaccacctttagcgacttccgcgatctcaccggcaccaacggc
aactacggccatgcggcatgggtgtaccgccgcagcggtgagccctgcagggtctgcggc
agccctatccagcgcgacaaactgtcgggccgcagcagccactggtgccccaactgccag
ggtgggtga
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