Synechococcus sp. NIES-970: NIES970_01770
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Entry
NIES970_01770 CDS
T09762
Symbol
groEL-II
Name
(GenBank) chaperonin GroEL-II
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES970_01770 (groEL-II)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synn03019
]
NIES970_01770 (groEL-II)
03110 Chaperones and folding catalysts [BR:
synn03110
]
NIES970_01770 (groEL-II)
03029 Mitochondrial biogenesis [BR:
synn03029
]
NIES970_01770 (groEL-II)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
synn04147
]
NIES970_01770 (groEL-II)
Enzymes [BR:
synn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NIES970_01770 (groEL-II)
Messenger RNA biogenesis [BR:
synn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NIES970_01770 (groEL-II)
Chaperones and folding catalysts [BR:
synn03110
]
Heat shock proteins
HSP60 / Chaperonin
NIES970_01770 (groEL-II)
Mitochondrial biogenesis [BR:
synn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NIES970_01770 (groEL-II)
Exosome [BR:
synn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NIES970_01770 (groEL-II)
Exosomal proteins of other body fluids (saliva and urine)
NIES970_01770 (groEL-II)
Exosomal proteins of breast cancer cells
NIES970_01770 (groEL-II)
Exosomal proteins of colorectal cancer cells
NIES970_01770 (groEL-II)
Exosomal proteins of bladder cancer cells
NIES970_01770 (groEL-II)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAW95275
LinkDB
All DBs
Position
complement(187355..189022)
Genome browser
AA seq
555 aa
AA seq
DB search
MAKIVSFKDDSRRSLEAGINALADAVKITLGPKGRNVLLEKQYGAPQIVNDGITVAKEIE
LSDPLQNTGARLIREVASRTNDSAGDGTTTATVMAQALIREGLKNVTAGANPMSLRRGID
AAVKFLVKEVAAIAKPVEGDAIAQVAAVSAGNDEEVGQMISDAMAKVTKDGVITVEESKS
LATELDVVEGMQLDRGYISPYFVTDQERQIVEFENPYILLTDKKISAIADLVPALEQVAR
SGRPLLIIAEDLEGEALATLVVNKARGVLNAAAIKAPSFGDRRKQMLQDIAVLTGGRVIS
EEVGLSLEAIELDMLGTAEKITISKEETTIVSGGGSKADIDARVGQIRKQLAETDSEYDM
EKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHL
AGKLAAVKDSLSDAEEKLGVDIVARALEAPLRQLANNAGVEGSVVVERVRNSEANIGYNA
ATNEYVDMIAAGIIDPAKVVRSVLQNAASIAGMVITTEALVVEKPEPEAAAPDMGGGMPG
MGGMGGMGMPGMGMM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctaagattgtctcttttaaggatgactcccgccgctccctcgaagctggcattaat
gccctcgccgatgcggtcaaaattacgttagggcctaagggtcgcaacgtattactcgaa
aagcagtacggtgcaccccagatcgtgaacgatgggatcaccgtcgccaaggaaattgaa
ctcagtgacccgctgcaaaatactggtgctcgcttgatccgagaagtcgcttccagaaca
aatgacagcgctggggatggcaccaccaccgccaccgtcatggcccaagctctgattcgt
gaaggtctgaagaatgtgactgctggcgctaaccccatgtctctccgccgggggattgat
gccgcagtgaaatttctcgtgaaagaagtagccgcgatcgccaagcccgttgaaggggat
gcgatcgctcaagtggccgctgtttctgccgggaacgacgaagaagtgggccagatgatc
tccgatgccatggccaaggtcaccaaagatggcgtgatcaccgttgaagagtctaaatcc
ctcgccaccgaactggacgtagtagaagggatgcaactcgatcgcggctacatctccccc
tatttcgtcaccgaccaagagcgccaaatcgttgagtttgaaaatccctacattttgctc
accgacaagaaaatttcggcgatcgccgacctcgttcctgccctcgaacaggtggctcgt
tccggtcgtcccctgttgatcatcgctgaagatctggaaggggaagccctcgctaccctc
gtggtgaacaaagcccggggcgttctcaatgccgctgcgatcaaagcgcccagttttggc
gatcgccgtaagcaaatgctccaggatatcgctgtgctcaccggtggccgcgtgatctcc
gaagaagtgggtctgagccttgaggcgatcgagctggatatgctcggcaccgctgaaaaa
atcacgatcagcaaagaagaaaccaccatcgtttccggtggcggcagcaaagctgacatc
gatgcccgggttggtcaaattcggaagcaactggctgaaaccgactccgaatacgacatg
gagaaactccaggagcgcatcgctaaactggcgggtggtgtcgccgtgatcaaagtcggc
gcggccactgaaaccgaactcaaagatcgcaagctccgcatcgaagatgccctcaacgcc
accaaagcggctgtggaagaaggcattgttcccggtggtggtacgaccctaattcacctc
gccggcaaactggctgctgtaaaagacagcctcagtgacgccgaggaaaaattaggggtc
gacattgtggcccgcgccctcgaagcgcccctccgccagttggccaacaatgctggggtt
gaaggctctgtcgtcgttgaacgggtccgtaatagcgaagccaacattggctacaatgct
gccactaacgaatatgttgacatgatcgccgctgggattattgacccggccaaggtcgtt
cgttccgtgctgcaaaatgccgcttctatcgcgggtatggtgatcaccactgaagccctc
gttgtcgagaagcccgaaccggaagcggctgcccctgacatgggtggcggcatgcctggt
atgggtggcatgggcggcatgggaatgcccggtatggggatgatgtaa
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