Synechococcus sp. NIES-970: NIES970_01830
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Entry
NIES970_01830 CDS
T09762
Symbol
clpC
Name
(GenBank) endopeptidase Clp, ATP-binding chain C, protease regulatory subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
synn
Synechococcus sp. NIES-970
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
synn03110
]
NIES970_01830 (clpC)
Chaperones and folding catalysts [BR:
synn03110
]
Heat shock proteins
HSP100
NIES970_01830 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
nSTAND3
UVR
AAA_18
AAA_14
AAA_28
Zeta_toxin
IstB_IS21
TsaE
AAA_25
AAA_23
Mg_chelatase
NACHT
ATPase_2
Torsin
NBD_SMAX1
AP1AR
Mre11_C_bact
Motif
Other DBs
NCBI-ProteinID:
BAW95281
UniProt:
A0A1Q2TU86
LinkDB
All DBs
Position
194853..197318
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AA seq
821 aa
AA seq
DB search
MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLRSMGVNLKDAR
IEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVA
ARVLENLGVDLSKVRTQVIRMLGETAEVAAGGGSSRSNKTPTLDEFGSNLTQLAKDGKLD
PVVGRQNEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRISTGDIPDILEEKRVV
TLDIGLLVAGTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANIL
KPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILFGLRERYEQ
HHKLKILDEALDAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLINSQLPPEAKELDKEL
REVLKAKDEAVRSQDFDKAGELRDREMEIKTEIRAIAASQKEKSTDIDAVVDAEEIAHIV
ASWTGVPLNKLTESESTKLLNMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIAS
FVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYNEGG
QLTEAVRRRPYTVILFDEIEKAHPDIFNMLLQILEDGRLTDAKGRTVDFKNTLIILTSNI
GSKVIEKGGGGLGFEFGEDAAESQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNKE
EVKEISEILLKDVFKRLTEQEITLQVTDKFKERLVEEGYNPSYGARPLRRAIMRLLEDVL
AEEILSGRVGSGDTAIVDINEEGKVAVSKAEKTLELAKQPG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgcttcacagaaaaagctattaaggtgattatgcttgcccaagaggaagcg
cgtcgccttggtcacaacttcgtgggtacagagcaaatcctcctcggtctcattggtgag
ggaacaggagttgctgctaaagtactccgctctatgggcgtcaatctcaaggatgctcgc
attgaagttgaaaaaattattggtcggggttccggtttcgtcgccgtagagattcctttt
acgcccagagccaagcgggttttagagctttccctcgaagaggcgcgccagttgggtcac
aactacattggcacggagcatttgttacttggcttgattcgtgaaggggaaggggttgct
gccagagtcctcgaaaatttaggggtagatttatctaaggtcagaacccaagtcattcgg
atgttgggtgaaacggcggaagtggccgctggtgggggctcttctcgcagtaacaaaaca
ccaaccctcgatgaatttggctctaatctcacccagctcgctaaagatggcaaattagac
cctgttgttggtcgccaaaatgaaatcgaacgggtaatccagatccttgggcggcgtact
aagaataatcctgtcttgattggggaaccgggggtcgggaaaaccgcgatcgccgaaggt
ctggcccagagaatttccacgggtgacatccccgatatcctcgaagaaaaacgggtggtc
accctcgatatcggtctcctcgtcgccgggacaaaatatcgcggtgaatttgaagagcgt
ctcaaaaagattatggacgaaattcgtcaagctggaaacgtgattctggtgattgatgaa
gtccacactttaatcggtgcaggagctgcggaaggggcgatcgatgctgccaatatcctc
aagcctgcccttgcccggggtgaactgcaatgtatcggggcgaccacccttgatgaatac
cgcaagcacattgagcgcgatgctgcccttgaacgtcgtttccagcccgtcatggtgggt
gagccttctgtggaagaaaccatcgaaatcctcttcggtctgcgggaacgctacgaacag
caccacaaactgaaaattttggacgaagccctcgatgcggcggcaaagttggcagaccgc
tatatcagcgatcgcttcttgcccgataaggcgatcgacttgatcgacgaagccggttcc
cgggtacgcttgatcaattctcaactgccccccgaagcgaaggaactcgataaagaactg
cgggaagtcctcaaggccaaggatgaagctgttcgttcccaagatttcgataaggcaggt
gaactgcgtgaccgcgaaatggagatcaaaaccgaaattcgggcgatcgccgcaagccag
aaagagaaaagcaccgatatcgatgctgtggtcgatgctgaagagatcgcccatatcgtc
gcctcttggacaggggtgcccctcaacaagctcaccgagagcgagtctaccaagctcctc
aacatggaagacaccctacaccagcgcctaattggtcaggaagatgcggtcaaggccgta
tcccgagccatccgtcgcgcccgggtcggtctgaaaaatcccaaccgtccgatcgctagc
tttgtcttctctgggcccaccggggtcggtaaaacggagctcaccaaagctctcgctgcc
tacttcttcggttctgaagatgcgatgattcgcctcgacatgtccgaatttatggaacgg
cataccgtttctaagttgattggttctcctccaggctatgtcggctacaacgaaggcggt
caactcaccgaagctgtgcgccgtcgtccctacaccgtcattctctttgacgaaatcgag
aaggcccaccccgacatcttcaacatgctcctgcaaatccttgaagatggccgcctcacc
gatgccaaaggacgcaccgtcgacttcaaaaacaccctgattatcttgacttctaacatc
ggttccaaggtgatcgaaaaaggtggcggtggccttgggttcgagtttggtgaagatgct
gccgagtcccaatacaaccggattcgctccttggtgaacgaagaattaaaacaatacttc
cgccccgaattcctcaaccgtctcgacgaaatcattgtcttccgtcagctcaataaagag
gaagttaaagaaatttccgaaattctcctcaaggatgtctttaagcgcctaacagagcag
gaaatcaccctacaagtgaccgacaaatttaaggaacgtcttgtggaagaaggctataac
ccctcctatggggcgcgtcccttacgtcgggcgatcatgcgcttgttagaggatgttctc
gctgaggaaatcctctcgggccgtgttggttctggtgatacggcgatcgtcgatatcaac
gaagaaggaaaagtggccgtcagtaaggcagaaaaaaccctagagctggctaaacaacca
ggctag
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