Synechococcus sp. NIES-970: NIES970_04060
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Entry
NIES970_04060 CDS
T09762
Symbol
sbcD
Name
(GenBank) putative exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
synn
Synechococcus sp. NIES-970
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synn03400
]
NIES970_04060 (sbcD)
DNA repair and recombination proteins [BR:
synn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES970_04060 (sbcD)
Archaeal homologous recombinant proteins
NIES970_04060 (sbcD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAW95499
UniProt:
A0A1Q2TUU3
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Position
complement(424561..425790)
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AA seq
409 aa
AA seq
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MFKILHFADIHMGSGFSHGQVNPETGLNSRLEDFERTLGLCIDRAIAEPVDLVIFAGDAF
PDATPAPYIHEAFAGQFRRLVAHNIPAVLVVGNHDQYSQGSGGASLNIYRTLAVPGFIVG
DRLKTHTLELAKGPLQIITLPWLNQATLLTKQETEGKPLNEIHQILLSKLEPILEAEIRR
LDPNIPAILVGHLMADRANLGAERLLAVGKGFNIPVAFLNRPELDYVALGHVHRHQNLNP
NNNPPIVYPGSIERVDFSEEKEDKGYVLIKLSKGQTDWKFFPLPVREFLTIKIDVSESEQ
PEADILAEIQQFPVVDRVVRLIYKIRPEQSDQINLRTLRKSLNSAHQVFLQAELVSQLSR
PRLPELGLGESLDPMNALDTYLANREDLQAIAPAMREAAEQFLALTETP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaattcttcactttgcagatattcacatgggaagcggtttctcccatggtcaa
gtgaatccagaaacaggcttgaattcgcgcctcgaagattttgagcggacccttggtctt
tgtattgaccgggcgatcgccgaacctgtcgatctggtgattttcgccggggatgccttt
cccgatgccaccccagccccctatatccatgaggcttttgcggggcaatttcgccgcctt
gtggctcacaatattccggctgtccttgtcgtcggcaaccacgatcaatattcccagggg
agtggaggcgccagtttaaatatctatcgcacccttgctgtgccaggttttatcgtgggc
gatcgcctaaagacccacaccttagaactggcgaaagggccgctacaaattatcaccctg
ccctggctcaaccaagccaccctgctaacgaaacaagaaaccgaaggcaaacccctcaac
gaaatccaccaaattctcctcagtaaacttgaacccatcctcgaagccgaaattcggcgt
cttgatcccaacattcctgccatcctcgtcggccacctgatggcagaccgggccaacttg
ggggcagaaaggttgctggctgtgggcaaaggctttaatattcccgttgcttttctcaac
cgccccgaactagactatgtggcccttggccatgtgcaccgccaccaaaatcttaacccc
aacaacaatccgccgattgtttatcccggcagcatcgaacgggtggatttcagcgaagaa
aaagaagataaaggctatgtattaatcaaactcagtaaaggtcaaaccgactggaaattt
ttccctttgcctgtccgcgagtttctcaccatcaaaatcgatgtcagtgaatcagagcaa
ccagaggcggatattctcgcagaaattcagcaattccctgtagtagatcgggtcgtgcgc
ttaatttataaaatccgcccggagcaaagtgaccagattaacctacgcaccctaagaaaa
agtttaaattctgcccaccaagttttcctccaggcagaactagtcagccaattgtcccgc
cctcgcctgccagagttgggcctcggtgaatcccttgacccgatgaatgcccttgatacc
tacctcgccaaccgggaagatctccaggcgatcgccccggccatgcgtgaagccgcagaa
cagtttctcgccttaaccgagacaccatag
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