Synechococcus sp. NIES-970: NIES970_04580
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Entry
NIES970_04580 CDS
T09762
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn03030
DNA replication
synn03430
Mismatch repair
synn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES970_04580 (holA)
03430 Mismatch repair
NIES970_04580 (holA)
03440 Homologous recombination
NIES970_04580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synn03032
]
NIES970_04580 (holA)
03400 DNA repair and recombination proteins [BR:
synn03400
]
NIES970_04580 (holA)
Enzymes [BR:
synn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES970_04580 (holA)
DNA replication proteins [BR:
synn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES970_04580 (holA)
DNA repair and recombination proteins [BR:
synn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES970_04580 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
CcdA
HNH_5
Motif
Other DBs
NCBI-ProteinID:
BAW95549
UniProt:
A0A1Q2TUZ5
LinkDB
All DBs
Position
476020..477000
Genome browser
AA seq
326 aa
AA seq
DB search
MAVYFFWGEDDFAIAQAIDQLKQSILDPAWLSFNFQTYDGSKEESIIAALNEVMTPPFGM
GGRLVWLNEASLCQSCSESLLQELQRTLPVIADNAHLLITSRKKPDKRLKSTKLIHEQAK
VREFSPIPPWQTEALADRVKATARELGVNLDRQATELLGEAVGNDTRRLWNELEKLKIYQ
GDRPQPLTQSEIQTLVVATNQNSLQLCEAIRKGQGGVALQLVGELLAQNEPALKITATLI
GQFRLWTVIKVMEEAGERDEGAIAKLADLKNPKRLFFLRKEIARLPSQKLLKALPILLEL
EAGLKQGAIAAEFLPTKILQLCEQFH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtattttttctggggtgaggatgattttgcgatcgcccaagcaatcgatcaa
ctcaagcaatctattctcgacccggcttggctctcgtttaattttcaaacctacgatggc
agcaaagaggagagtattatcgccgccctcaacgaagtgatgacgccaccttttggcatg
gggggccggctggtctggctcaatgaagcaagcctatgtcagtcctgttccgaaagtctt
ttgcaagaattacagcgcactttacctgttattgccgacaatgctcacctgttgattacc
agtcgcaaaaaacccgataagcgcttgaaatcgacaaaactgatccatgaacaggccaag
gtgcgggaattttcgccgattcccccttggcagacagaagccctcgccgaccgagtcaag
gcaactgcgcgggaattgggggtaaacctcgatcgccaagcgacggaattgttgggagaa
gcggtgggtaacgatacgcggcggctctggaatgaattggaaaaactaaaaatctaccaa
ggcgatcgccctcaacccttaacccagtcagaaattcaaaccctggtggtggccaccaat
caaaatagcctgcaactttgtgaagcgattcggaaaggtcaagggggggttgctctgcaa
ttagttggggaattgctcgcccaaaatgaaccggccctcaagattacggccacgctcatc
ggtcaatttcgcctctggacggtcattaaagtcatggaggaagcgggagaacgcgatgaa
ggggcgatcgccaaactcgcagatctcaaaaacccgaagcgtttattttttttgagaaaa
gaaattgcacgactaccgagtcaaaaattactgaaagccttgccaattttactggagctc
gaagcgggtttaaagcagggggcgatcgccgctgaatttctccccacaaaaattctccaa
ctctgtgaacaatttcattaa
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