Synechococcus sp. NIES-970: NIES970_05040
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Entry
NIES970_05040 CDS
T09762
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn00220
Arginine biosynthesis
synn00240
Pyrimidine metabolism
synn00250
Alanine, aspartate and glutamate metabolism
synn01100
Metabolic pathways
synn01110
Biosynthesis of secondary metabolites
synn01240
Biosynthesis of cofactors
Module
synn_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NIES970_05040 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NIES970_05040 (carB)
00220 Arginine biosynthesis
NIES970_05040 (carB)
Enzymes [BR:
synn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NIES970_05040 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_5
GARS_A
ATP-grasp_2
RimK
DUF900
Motif
Other DBs
NCBI-ProteinID:
BAW95595
UniProt:
A0A1Q2TV53
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All DBs
Position
complement(522561..525809)
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AA seq
1082 aa
AA seq
DB search
MPRRDDIKKILILGSGPIVIGQACEFDYSGTQSCKALREEGYEVVLVNSNPATIMTDPET
ADRTYIEPITPEIVAKVIEKERPDALLPTMGGQTALNTAVSLAKNGTLDKYNVELIGAKL
EAIEMAEDRDLFKQAMARIGVPVCPSGIASNLDEAKAVAEEIGSYPLIIRPAFTMGGTGG
GIAYNQEEYEKMAKFGIECSPMSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENLDP
MGVHTGDSITVAPAQTLTDKEYQRLRDYSLKIIREIGVETGGSNIQFSVNPLNGDVIVIE
MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLDEISNDITKKTPASFEPTIDYVVTKIP
RFAFEKFPGSSPVLTTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDRQETLPSL
SHVSSSLRTPNPDRIYSIYHALKLGMTVEEIHELTAIDIWFLDKLADLLVTERFMKQTSL
TEISAENMRVIKQQGFSDRQIAYATKTNEDAVRAYRKSLGIVPVYKVVDTCAAEFEAFTP
YYYSTYDGTETEVIPSDKQKVMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNS
NPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPAGVIIQFGGQTPLKLAVPLEKYLNAS
DCPVQTKIWGTQPDAIDTAEDRERFEKILHALDIIQPANGIARDYHEAQRVANRVGYPVV
VRPSYVLGGRAMEIVYSDEELEHYMVYAVQVEPDHPILVDKFLENAIEVDVDALCDRTGK
VVIGGIMEHIEEAGIHSGDSACSLPHTSLADEVLTTIREWTVKLARTLKVVGLMNIQYAV
KDNQVYILEANPRASRTVPFVSKATGRPLAKIASLVMSGKTLDELGVDGEIITKHIAVKE
AVLPFNKFEGTDTLLGPEMRSTGEVMGIDVDFGKAFAKAELGAGVQLATEGTIFVSMDDR
NKEAAVPVVKDLIELGFRVVATSGTRKVLLDNGIEDVELVLKLHEGRPHVVDWMKNGWIQ
FIINTPSGEESQTDGRMIRRTALDYKLPIITTLAGARATVAAIRSLQDHPLDVKPLQEYL
NV
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgcgacgacatcaaaaaaattctaatccttggttctggcccgattgtgatt
ggacaagcctgtgagtttgactactctggcacccaatcctgtaaggcgctgcgggaggaa
ggctatgaagtggttttggtgaactccaaccccgccactattatgacggatcccgaaacc
gccgaccgcacctacatcgaaccgatcaccccagaaattgtcgccaaagtgatcgaaaaa
gagcgtcccgatgccctactccccaccatgggcggccagacagctttaaatacggctgtt
tccctcgcaaaaaatggcaccctcgacaaatacaatgtggagctgatcggcgcaaaatta
gaggcgatcgagatggcagaagaccgcgacctcttcaaacaagcgatggcgcggatcggt
gtacctgtgtgtccgtcgggcattgccagcaacctcgatgaagccaaagcggtcgccgaa
gaaattggcagctatccgttgattattcgtcctgccttcaccatgggcggcaccggaggc
ggcattgcctacaaccaagaagaatacgaaaagatggcgaaattcgggattgaatgttcc
ccaatgtcccaaattctcgtggaaaaatccctcctcggctggaaggaatatgagctagag
gtgatgcgggatctggccgataacgtggtgattatttgctccatcgaaaaccttgacccg
atgggggtacacacaggggattcgatcaccgttgccccagcccaaaccttgacagataag
gaatatcaacggttgcgggattattcgctgaaaattattcgggaaattggtgtcgaaacg
ggcggctccaacattcagttctcggtgaaccccctcaatggggatgtgatcgtcattgaa
atgaacccccgggtttcccgttcctcggccttggcctccaaggcaacgggtttcccgatc
gccaaatttgcggcgaagttggcggtgggttacacgctggacgagatttccaacgacatt
acaaagaaaacccctgcttctttcgagccaaccattgattacgttgttacgaaaattccg
cgctttgcctttgagaaattccctgggtcttccccagtgctcaccacccaaatgaaatct
gtgggcgaggcgatggcgatcgggcgcaccttccaagaatccttccaaaaggcgttacgt
tcgctggaaaccgggcggtttggttttgggtgcgatcgccaagaaaccttacccagcctg
agccatgtgtctagcagtctgcgcacgcccaaccccgaccggatttacagcatttaccac
gcgctgaaattgggcatgaccgtcgaagaaattcatgaactgacggcgatcgacatttgg
ttcctcgacaaactggcagatttgctggtcaccgaacgcttcatgaaacagacttccctc
acggaaatctctgccgaaaatatgcgggtgatcaaacaacagggatttagcgatcgccaa
attgcctatgccaccaaaaccaatgaagatgcggtgcgcgcctaccgcaaatcccttggc
atcgtgcctgtgtataaagtagtggatacctgcgccgccgaatttgaagcctttacgccc
tactactactccacctacgacggcacggaaaccgaggtaatcccctccgacaaacaaaag
gtgatgatcctcggtgggggtcccaaccgcattggacaggggatcgaatttgactattgc
tgttgccatgcggcgttctccctcagtgatgcgggctacgaaacgatcatggtcaactcc
aaccctgaaacagtttccacggactacgacaccagcgatcgcctctattttgaaccgctg
actaaggaagatgtcctcaatattatcgaagccgaaaaccccgccggcgtgatcatccag
ttcggtggccaaacccccctgaaactggctgtgccgttggaaaaatatctcaacgcctcc
gattgccccgtgcaaacgaaaatctggggaacccaacccgatgcgatcgacaccgccgag
gaccgcgaacgcttcgagaaaattctccatgccctcgatattattcaacctgccaatggt
atcgcccgcgactaccacgaagcccaacgggtggcgaaccgggtgggttatcccgttgtg
gtgcgtccctcctatgtgctcgggggtcgggcgatggaaatcgtctattccgacgaagaa
ttagaacattacatggtctatgcggtgcaggtggaacctgatcacccgattttggtggat
aaattccttgaaaatgccattgaagtcgatgtggatgccctctgcgatcgcactggcaaa
gtagtcattggcggcatcatggaacacatcgaagaggcagggattcactctggcgattcc
gcctgttccctgccccatacctcccttgccgacgaagtgttgaccacgatccgcgaatgg
actgtcaaacttgcccgtaccttaaaagtcgtcggtttgatgaacattcaatatgccgtc
aaagataaccaagtctatatcctcgaagcaaacccccgggcttctcgtactgtaccgttt
gtctcgaaggcaacgggccgccccctcgcgaaaattgcctctttggtaatgtctggtaaa
accctcgatgaattgggtgtggacggtgagattatcaccaaacatattgccgtgaaagaa
gcagtcctccctttcaataaatttgagggcacagatacattactcgggcctgaaatgcga
tcgactggggaagtaatgggcatcgatgtggactttgggaaagcctttgccaaagcagaa
cttggggcaggagtacaacttgccaccgaaggtacaatcttcgtttccatggatgatcgc
aataaggaagcggctgtcccagtggtgaaagatctcattgagttaggtttccgggttgtg
gcaacatctggcactcgcaaggttttgttagacaacggtattgaggatgtggaactcgtt
ttaaaactccatgaaggccgtccccatgtggtcgattggatgaaaaatggctggatccag
ttcatcattaatacgccttctggtgaagagtcccaaactgatgggcggatgattcgtcgt
actgcccttgactataagctgccaattattactaccttggctggggcaagggccacagtg
gcggcaattcgttccttacaggatcacccccttgatgtgaagccattgcaggaatatctc
aatgtttaa
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