Synechococcus sp. NIES-970: NIES970_05710
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Entry
NIES970_05710 CDS
T09762
Name
(GenBank) DEAD/DEAH box helicase protein
Organism
synn
Synechococcus sp. NIES-970
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_cyano_M
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
nSTAND3
ATPase_2
AAA_22
DUF3516
Par-4_C
AAA_30
AAA_19
PhoH
Motif
Other DBs
NCBI-ProteinID:
BAW95661
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Position
complement(590955..593828)
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AA seq
957 aa
AA seq
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MQVDLNQVFPFPLDEFQQKAIAALNADRSVVVCAPTGSGKTVIGEYAIHRALAMGQRVFY
TTPLKALSNQKFRDFGDTFGEKQVGLITGDVIINGQATIVVMTTEIFRNMLYETPIGQVG
TSLENVSTVVLDECHYISDRGRGTVWEESIIYCPSEVQIVGLSATIGEPEIFTAWINKTR
QAAHADHPNRKEHRCELVDSDHRPVPLQFLYSNKKGLYPLLDDSGAKMNPRLRSRDHAPQ
GKRKKRQREDCPSLFTIVRQLRQKDLLPAIYIIFSRRGCDQSVTQLKEMTLVSPEEAKLL
EATLLHFFLDNQPKLQEKLLKQCDDTPDFSALVLDFIAKNPFSTEKLVAYLEANPTLREQ
LWQYLAQESKFARPEQVEPLLRGIAAHHAGILPAWKELVEKLFEMGLVKLVFATATLAAG
INMPARTTVITALSKRTDEGHRMLTPSEFLQMAGRAGRRGMDTVGYVVTVETPFEGAKEA
ARLALSEAEPLRSWFTPSYGMVLNLLQKHSLEESKELLSRSFAEYQVQQQLSPEQEAIAE
LTTEIAHLDIDLAAIDERHFERYGKLKERLKEEERLLGILREQAELENRKLLAPLVDQLP
LGSILHLKGKNLRVKEAIAAVLVEQTAGQQFLCLGTDKQWYLVTNMDVVALNEGLYPADK
LAQIPLPIDQKLTLGKNGKVDAEAFPLVKAIADYLLPLVEAPEVEAQKQRVVAVQAQFAA
SPLNQHDKPGKLLKRYQRRKELHKELNRRQTLYRQHANKRSYYWQDFLNLIEVLQEFHAL
DKYTPTVLGRAAATIRGENELWLALCLMSGQLDHLSPEHLAAAICAIISEPPRGDSWTDY
PQPQAVLEVLGIRKKDQGHNPVSLWELRRQLYQVQKHCGVTMPVWLESKFIGLIEQWALG
AEWTELCDNTSLDEGDIVRMLRRTVDVLWQIPQIPEIKPGLMRTAKEAIAKMKRFPV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagtagatttaaatcaagtttttccattcccgttagatgagtttcaacaaaaggcg
atcgccgccctcaatgccgacagatccgtggtagtttgcgcacccacaggttctgggaaa
accgtcattggtgaatatgccatccaccgcgccctagccatgggtcaacgggttttttat
accacccccctcaaggccctttccaaccaaaaatttcgtgattttggcgatacttttggc
gaaaaacaagtcggcttaatcaccggtgatgtgattatcaatggtcaggccaccatcgtc
gtcatgaccaccgaaatttttcggaatatgctctacgaaacccccattggtcaggtgggc
acttccctggaaaatgtctccaccgtcgtcctcgatgaatgtcactatattagcgatcgc
ggccggggcaccgtctgggaagaatcgattatctattgcccttcagaagtccaaattgtc
gggctatcggcaaccattggtgaacccgaaattttcaccgcctggatcaacaaaacccgt
caagccgcccatgccgatcaccctaatcgtaaagaacaccgttgtgagcttgtcgattcc
gaccatcgccctgtcccactccaatttctctacagcaacaaaaaaggcctttacccgctc
cttgatgacagcggcgcaaagatgaatcctcggttgcgatcgcgtgaccatgccccccaa
ggaaaacgcaaaaaacgtcaacgggaagattgccccagcctgttcaccatcgtccggcaa
ctgcgtcaaaaagacctgcttccagcgatctacatcatttttagtcggcggggttgtgac
caatccgtcacccagctcaaggagatgaccctggtttcccccgaagaagccaaactcctc
gaggcgaccttactccactttttccttgataatcagccaaaactccaagaaaaactcctc
aagcaatgcgatgacaccccagactttagtgctctggtgttagatttcatcgcaaaaaat
cccttctccacagagaaattagtcgcttatctcgaagcaaatcccaccctccgggaacag
ctttggcaatacctcgcccaggagtcgaaatttgcccggcccgaacaggtagaacctctc
ctgcgggggatcgccgctcaccacgccgggattttgcccgcctggaaagaactggtggaa
aaactctttgaaatgggcctggtgaaattggtttttgcgacggctaccctggcagccggg
attaatatgcctgctcgcaccaccgtgatcaccgccctctcgaagcgtaccgatgaggga
caccgaatgctcaccccctcagaatttttgcagatggcgggccgagccggacggcgggga
atggatacagtgggttatgtggtcactgtagaaacaccttttgaaggggcgaaggaagca
gcccgtttagctctctcggaggcggagccgctgcgtagttggtttacaccctcctatggt
atggtgcttaacctcttgcaaaaacatagtttagaggagtcaaaggagctactgtctcgg
agttttgcggaatatcaggtgcaacagcagctcagccctgaacaggaggcgatcgccgaa
ctgaccaccgaaattgcccacttagatattgacctagcggcaatcgatgagcggcacttt
gaacgctatggcaagctgaaagagcggctcaaggaagaagagcggctattggggattttg
cgggagcaggcagaattagaaaaccgtaaattgcttgcccccctggtagatcagttgccc
ctgggctcgattctgcacctcaagggaaaaaatttgcgggtcaaggaggcgatcgccgct
gtcctcgtcgagcagaccgctgggcagcagtttctctgtttggggacagataaacaatgg
tatctggtgacgaatatggatgtggtcgcccttaatgaaggtctctatccggccgataaa
ctggcccagattcccctgcccatcgaccaaaagctcaccttaggcaaaaatggcaaagtc
gatgcagaagcctttcccctcgtgaaggcgatcgccgattatctgctgcctttggtcgaa
gctcctgaagtagaggcccaaaagcaacgggtggtcgctgtccaggcccagtttgccgcc
tcgcccctgaaccaacatgacaagcccggtaaactcctcaagcgataccaacggcgcaag
gaattacacaaagaattaaaccgccgccagaccctctatcggcaacatgcaaacaagcgc
tcctactattggcaagactttctcaatctcattgaggtattacaagaattccatgccctc
gataaatatacgccgacggtattgggtcgtgctgcggccaccattcgcggagaaaatgaa
ctgtggctggccctctgcctgatgtctggccaattagatcacctctcccctgaacattta
gcagcggccatctgtgcgattatcagtgaaccgccccggggcgatagctggactgactat
ccgcaacctcaggccgtattagaggtattgggcattcgtaaaaaagaccaaggccacaac
ccggtgagtctctgggaactgcgccgccaactctaccaggtgcaaaaacactgtggtgtg
accatgcccgtttggctagaaagtaagtttatcggcctgatcgaacagtgggccttggga
gcagaatggacagagctctgcgataacaccagcctcgacgagggggatattgtgcggatg
ctacggcgcacggtggatgtgctctggcagattcctcaaatcccggagattaaaccgggc
ttaatgcgcactgcaaaggaggcgatcgccaaaatgaaacgcttccctgtctag
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