Synechococcus sp. NIES-970: NIES970_05970
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Entry
NIES970_05970 CDS
T09762
Symbol
rnc_1
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
synn
Synechococcus sp. NIES-970
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NIES970_05970 (rnc_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synn03019
]
NIES970_05970 (rnc_1)
03009 Ribosome biogenesis [BR:
synn03009
]
NIES970_05970 (rnc_1)
03036 Chromosome and associated proteins [BR:
synn03036
]
NIES970_05970 (rnc_1)
Enzymes [BR:
synn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NIES970_05970 (rnc_1)
Messenger RNA biogenesis [BR:
synn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NIES970_05970 (rnc_1)
Ribosome biogenesis [BR:
synn03009
]
Eukaryotic type
90S particles
RNase
NIES970_05970 (rnc_1)
Prokaryotic type
rRNA processing factors
NIES970_05970 (rnc_1)
Chromosome and associated proteins [BR:
synn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NIES970_05970 (rnc_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BAW95687
UniProt:
A0A1Q2TVE5
LinkDB
All DBs
Position
complement(618656..619420)
Genome browser
AA seq
254 aa
AA seq
DB search
MTSLPPFRRSPLLLQALTHRSFANEQSEETADNERLEFLGDAVLKFIMGKLLYERYPDFQ
EGELSRLRASLENNRHQLAEFAQGLGLDQVLRLGKGAEKEGARQNPEILSNTFEAIVGAY
FLDAGIEATIAFVEDLVIPVADRLVNEPSDPLAQNFKGQLQEWALAHQGEVPKYKTLAES
GADHAKTFTVAVYIAGKEWGRGSAASKKQAQKIAAQAALQKLMPSPTPNNNPTLGDRFAL
LQALATQINLPKSL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtttgcccccttttcggcgatcgcctctattgttacaggctctcactcaccgc
tccttcgccaatgagcaatcggaggagacggcagacaatgaacgcctagaatttttgggg
gatgcggttctgaaatttatcatgggcaagttactttatgagcgttatcctgatttccaa
gaaggggagttgagtcgtttacgggccagcttagaaaacaatcgccatcaattggcggag
tttgcccaggggcttggcttagatcaggtgctgcgcttagggaaaggagctgaaaaagaa
ggggctaggcaaaatcctgaaattctgagtaatacctttgaggcaatagttggggcgtat
tttctcgatgccggcattgaagcgacgatcgccttcgtagaagatctagtgattcctgtg
gccgatcgcctagtgaatgaaccctcagatcccctcgcccaaaattttaaggggcagtta
caggaatgggccttggcgcaccagggcgaagtgcctaaatacaaaaccctggcagaatcg
ggggccgaccatgctaaaacttttaccgtcgctgtctatatcgcgggtaaggagtggggt
cgcggttctgccgcatccaaaaaacaagcccaaaaaattgcggcccaggctgcgttacaa
aaattaatgccatcccccactcccaacaacaaccccacgttgggcgatcgctttgccctg
ttgcaagcccttgctacccaaattaatctgcccaaatccctgtga
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