Synechococcus sp. NIES-970: NIES970_10250
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Entry
NIES970_10250 CDS
T09762
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
synn
Synechococcus sp. NIES-970
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synn03016
]
NIES970_10250 (truB)
Enzymes [BR:
synn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NIES970_10250 (truB)
Transfer RNA biogenesis [BR:
synn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES970_10250 (truB)
Prokaryotic type
NIES970_10250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAW96103
UniProt:
A0A1Q2TWJ9
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All DBs
Position
complement(1060802..1061749)
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AA seq
315 aa
AA seq
DB search
MEQQPTPELQGNHDWGFINLYKDAGWTSHDCVGKMRRLLGTKKIGHGGTLDPMATGVLPI
AVSKATRLLQYLPKQKAYRGIVRFGVKTTTDDLEGDVIFQQACGALTLTQIEAVLPNFLG
TITQIPPAFSAIQRDGKRLYELARQGIAVDVPSRQVEVSSLKIHAWQPGDFPELTLDIHC
GEGTYIRAIARDLGEKLGVGATLSGLTRTLSGGFALAESVTLEEIAAQREAGSFKFLPPD
QILAHLPRLVLTATQVEQWSYGQKIAWDPDLAEPLEAPLAIYDLANHCLGIGAFRPSKED
PAAIVLAGRVVLTGR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttggaacagcaacccaccccagaactccaggggaatcatgactggggatttatcaattta
tataaagatgctggttggacatcccatgactgtgtaggaaaaatgcggcggctcctgggg
acaaaaaaaattggccatggaggaaccctagatccaatggcgacgggggtactaccgatc
gccgtcagtaaagccactcgtctgttgcaatatttacctaaacaaaaggcttatcggggc
atcgtccgctttggggtcaagacaaccacagatgatttggaaggagatgtgattttccag
caagcctgtggtgctttaactctgacgcagattgaagctgttttaccgaattttttaggg
acgattacccaaattccacctgcttttagcgcgattcaacgggatggaaagcggctgtat
gagttagctcgccagggcattgcggtggatgtacccagtcgccaagtggaggttagttct
ctgaagatccatgcttggcaaccgggggattttccagaattaacccttgatattcattgc
ggcgaaggcacctacatccgggcgatcgccagggacctaggcgaaaaattaggggtaggg
gccaccctatctgggttaacccggacattgagcggtggttttgccttggcagaaagtgta
acccttgaagagattgcggcccagcgagaagcgggatcattcaaatttctcccacccgat
caaattctggcccatttaccccgattggttttaacagcgacccaggtggaacagtggagc
tatggccaaaaaattgcctgggaccctgatctggcagagcccctggaagccccccttgcc
atttatgatctggcaaatcattgcctcggtattggggcttttcgtccgagtaaagaagat
ccggcggcgatcgttttggccggtcgagttgttttgacaggtcgctag
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