Synechococcus sp. NIES-970: NIES970_15920
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Entry
NIES970_15920 CDS
T09762
Symbol
dnaE-C
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn03030
DNA replication
synn03430
Mismatch repair
synn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES970_15920 (dnaE-C)
03430 Mismatch repair
NIES970_15920 (dnaE-C)
03440 Homologous recombination
NIES970_15920 (dnaE-C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synn03032
]
NIES970_15920 (dnaE-C)
03400 DNA repair and recombination proteins [BR:
synn03400
]
NIES970_15920 (dnaE-C)
Enzymes [BR:
synn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES970_15920 (dnaE-C)
DNA replication proteins [BR:
synn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES970_15920 (dnaE-C)
DNA repair and recombination proteins [BR:
synn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES970_15920 (dnaE-C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
BAW96654
UniProt:
A0A1Q2TY59
LinkDB
All DBs
Position
complement(1640503..1643175)
Genome browser
AA seq
890 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQIKPLIQRAEELEMPAIALTDHGVMYGAIELLKTCRNKRIK
PIIGNEMYVINGDIEDKSKRLKKYHQVVLAKNTQGYKNLVKLTTISHLKGFQGKGIFARP
CINKELIEKHHEGLIMTSACLGGEVPQCILKGEYKRAREVAKWYKDLLGDDYYLEIQDHG
SQEDRIVNTEIVKIAQELDIKIIATNDSHFISCYDVEAHDALLCIQTAKLITEDKRLRYS
GTEYLKSADEMRQLFRDHLDPAIIDQAIANTLEVAAKVEPYKILGEPRIPDYPVPEGYTA
DSYLIEVTWGGLLDRLKCKTRAEVDPTYKERLEYELQMMQQMGFATYFLVVWDYIKYARD
NDIPVGPGRGSAAGSLVAYALGITNIDPIHHSLLFERFLNPERKSMPDVDTDFCIQRRDE
MIKYVTEKYGEDRVAQIITFNRMTSKAVLKDVARVLDIPYGEADQMAKMIPVARGKPAKL
QVMISDDTPEPEFKRRYETDPQVRRWVDMAIRIEGTNKTFGVHAAGVVISSTPLDEAVPL
QRNNEGAVITQYYMEDVEAMGLLKMDFLGLKNLTTIKKTADLVREYRQVDLDLDQLPLDE
RKALEIIAKGTAKKLPEDIQHTHKLFEDGLLEGIFQLESDGMKKIVQDLKPSGIEDISSI
LALYRPGPLDAGLIPIFIDRKHGRQKIEYQHEMLKPILNETYGVLVYQEQIMKMAQDLAG
YSLGEADLLRRAMGKKKIDEMKKHEAKFVKGAGENGVSEAIARDLFDQMVKFAEYCLAGD
TPVVTVEYGVLPIRTIVDQELLCHVYSLDPQGFIYTQPVEQWHRRGDRLLYEYELETGAV
IRATPDHKFLTATGEMLPIDEIFVRNLDLAAWPVPTAHWGSGSQAVGIVA
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtcggtttacacatccacagtgattacagtttgctcgatggggcatcccag
attaaaccgttgatccaacgggcagaggaactggaaatgccggcgatcgccttaacagat
cacggggtaatgtatggggcgatcgagctgttaaaaacctgccgcaataagcgtatcaaa
ccgatcatcggcaatgaaatgtacgtgatcaacggtgacattgaagataaaagcaagcgc
ctgaagaaataccaccaagttgttctcgcgaagaatacccaaggttataaaaatctcgtt
aaactcaccaccatttcccacctcaaagggttccagggcaagggaattttcgcccgcccc
tgcatcaataaagaactgatcgagaagcaccacgaagggctgatcatgaccagtgcctgc
cttggtggtgaagtgccccaatgcatcctgaaaggagagtataaacgggcgcgggaagtg
gcgaagtggtacaaagacctcctcggcgacgattattacctcgaaatccaagaccacggc
tcccaggaagaccgcatcgtcaacactgagatcgtcaaaattgcccaggaactggatatt
aaaattatcgccaccaacgattcccacttcatttcctgctatgacgtggaagcccatgat
gccctgttgtgtatccagacggctaaactgatcaccgaagataaacgcctccgctacagc
ggcacggaatatctcaaatctgctgacgagatgcgccagctcttccgagatcatctcgat
ccggccattatcgaccaggcgatcgccaacaccctcgaagtcgccgcaaaggtcgaaccc
tacaaaattttgggggaaccgcgcattcccgactatcccgtccccgaaggctacaccgcc
gacagttatctcatcgaagtcacctggggcggcttgctcgatcgcctcaaatgcaaaacc
cgcgccgaggtcgatcctacctacaaagagcgcttggaatacgagctgcaaatgatgcag
cagatgggctttgccacctactttcttgtggtgtgggactacattaaatatgcccgggac
aatgacattcccgtggggccggggcgcggttcggcggcgggttccctagtggcctatgcc
ctaggcattaccaatattgacccaattcaccacagccttttatttgagcgcttcctcaac
cccgaacggaagtccatgcctgacgtggatacagatttttgcatccagcggcgggacgaa
atgatcaagtacgtcaccgaaaaatacggcgaagaccgggtggcgcaaattatcaccttt
aaccggatgacctccaaagccgtgctcaaggatgtggcccgggtgctggatattccctac
ggagaagcagaccaaatggcaaaaatgatccctgtggcccggggcaaacccgccaaactc
caggtgatgatctccgatgacaccccagagcctgagtttaaacggcgctacgaaaccgat
ccccaggtgcgccgctgggtggatatggcgattcgcatcgaaggcaccaacaaaaccttt
ggggtccatgccgctggcgtggtgatttcttcaactcctttagatgaggcggttcccctc
cagcgcaataacgagggagcggtgatcacccagtactacatggaagatgtggaggcaatg
gggctcttgaagatggactttttgggcctgaaaaatctcaccaccatcaaaaaaaccgct
gatttggtgcgggaatatcgccaggtggacctggacttggatcagctccccttggacgaa
cgtaaagctctggaaattattgcgaagggcacggccaaaaagctaccggaagatatccag
cacacccacaaattatttgaagatggtctgctggaggggattttccagttggagtcggac
ggcatgaaaaaaattgtccaggacctcaaaccgtcgggcattgaagatatttcgtcgatc
ctggcgctctatcgaccggggcccttggatgcagggctgattccgatttttattgaccgg
aaacatggccgccaaaaaattgagtatcagcacgagatgctcaaacccatcttgaatgaa
acctacggggtcttggtttaccaggagcaaattatgaaaatggcccaggatttggcgggc
tattccctcggggaagcggatctgctgcggcgggccatggggaaaaagaaaatcgatgag
atgaaaaaacacgaggccaaattcgttaaaggggctggggaaaatggtgtttcggaggcg
atcgcccgggatttatttgaccagatggtgaagttcgccgaatactgcctcgccggggat
acccctgtagtgacggtggaatatggggtgctgccgattcggacgatcgttgaccaagag
ttactgtgccatgtgtatagccttgacccccagggctttatctatacacaacccgtggag
cagtggcatcggcggggcgatcgcctgctgtatgaatacgaactggaaacaggggcggtg
attcgagcgactccagatcacaaattcctcacggccacgggggaaatgcttcccattgat
gaaattttcgtccgcaacctagaccttgcggcctggcctgtgccaacagctcactggggg
tctggttctcaggcagtgggtatcgttgcctga
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