Synechococcus sp. NIES-970: NIES970_17990
Help
Entry
NIES970_17990 CDS
T09762
Name
(GenBank) sugar-specific transcriptional regulator, TrmB
KO
K09012
DeoR family transcriptional regulator, suf operon transcriptional repressor
Organism
synn
Synechococcus sp. NIES-970
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
synn03000
]
NIES970_17990
Transcription factors [BR:
synn03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NIES970_17990
BRITE hierarchy
Motif
Pfam:
HTH_24
MarR_2
HTH_5
HTH_11
HTH_DeoR
MarR
HTH_20
TFIIE_alpha
ATC_hydrolase
HTH_34
Mga
PadR
HTH_IclR
TrmB
FaeA
Rrf2
HTH_Crp_2
HTH_12
HTH_29
FeoC
Fe_dep_repress
Replic_Relax
GntR
HTH_28
PheRS_DBD1
HxlR
HTH_AsnC-type
HTH_PafC
HTH_1
AbiEi_4
HTH_micro
EAP30
HTH_30
LexA_DNA_bind
HTH_10
RP-C
HTH_23
DUF2250
SMC_ScpB
HTH_36
HTH_39
BLACT_WH
Motif
Other DBs
NCBI-ProteinID:
BAW96857
UniProt:
A0A1Q2TYQ3
LinkDB
All DBs
Position
1872236..1872892
Genome browser
AA seq
218 aa
AA seq
DB search
MTFSDTRAETRSTKHDILEYLLKHGQVKAVQLAESLHISPQAVRRHLKDLEEEGLIEHRA
KQEGLGRPHYFYELSRAGRDRFPSRYNDFAVSFLDTLVETAGEEQVKEILRKQWQKKAHS
YRDRLGKGSLQDRLIRLVDLRKEEGYMAEVIPATDHGHDGFLLTEHHCAIADVAESFPVV
CGNELEMFEEILPDCTITRTQWINEGEHQCGYIIQAKN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaccttttctgacacccgtgccgaaacccgttcaacgaagcatgacattttggaatat
ttactgaaacatggtcaagtgaaggctgtgcaattggcagaatctttacatatcagcccc
caggcggtgcggcgtcacctcaaggatttggaagaggaaggtttgatcgaacatcgcgcc
aaacaggaaggtttggggcggccccactatttttatgaattgagtcgagcagggcgagat
cgctttccgagtcgctataacgattttgcggtgtcttttctggatactttagtggaaacg
gctggggaagaacaggtcaaggaaattctccggaagcagtggcaaaagaaggcccacagt
tatcgcgatcgcctggggaaaggttctctgcaggatcgtctaatccgtttggtagatcta
cgcaaagaagagggctacatggcagaggtgatcccggccacagaccacggccatgacggc
tttttgttgacggaacatcactgtgcgatcgccgacgtggcagaatcctttccggtggtc
tgtggtaatgaactggagatgttcgaggagatcttgcccgactgcactatcacccgcacc
caatggattaatgagggggaacaccagtgcggctacattattcaggcgaaaaactag
DBGET
integrated database retrieval system
