Synechococcus sp. NIES-970: NIES970_20330
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Entry
NIES970_20330 CDS
T09762
Symbol
dnaX
Name
(GenBank) DNA-directed DNA polymerase III chain dnaX
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn03030
DNA replication
synn03430
Mismatch repair
synn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES970_20330 (dnaX)
03430 Mismatch repair
NIES970_20330 (dnaX)
03440 Homologous recombination
NIES970_20330 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synn03032
]
NIES970_20330 (dnaX)
03400 DNA repair and recombination proteins [BR:
synn03400
]
NIES970_20330 (dnaX)
Enzymes [BR:
synn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES970_20330 (dnaX)
DNA replication proteins [BR:
synn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES970_20330 (dnaX)
DNA repair and recombination proteins [BR:
synn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES970_20330 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
DnaA_N-like_STI
AAA_30
RuvB_N
TIP49
AAA_16
AAA_19
RCF1-5-like_lid
AAA_11
Rad17
AAA_18
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BAW97087
UniProt:
A0A1Q2TZD4
LinkDB
All DBs
Position
2114791..2116968
Genome browser
AA seq
725 aa
AA seq
DB search
MAYEPLHHKYRPQTFAQLVGQGAIAMTLSNALEQRRIAPAYLFSGPRGTGKTSSARILAK
SLNCLNSANPTPNPCGECEVCRAIANGSALDVIEIDAASNTGVDNIRELIERSQFAPVQC
RYKVYVIDECHMLSVAAFNALLKTLEEPPAHVVFVLATTDPQRVLPTIISRCQRFDYRRI
PLDAMVGHLRKIAQLENIEIPLESVTLIAQIANGGLRDAESLLDQLSLLAGEITPDKVWD
LVGAVPERDLLDLIQVIRNDSPEAVIQQCRSLLNRGREPLVVLQNLASFYLNLLIAKTAP
QRSDLMAVTQPTWVALCEEANFWPTATILQGQQRLKESEYQLKNTTQPRLWLEITLLGLL
PGALNQTETQGTAIAPPLSRSTSAALPPPSSKPEAPSHPFGPVPTAPHVESQPSPPPVVS
PATVPIQSPPPPLTSPGISPPPGGPLTPEFINGDRPVSPPQNSPPAPPQQSQSALNNGAI
ASAASSTTTTGSAISSLEREELWRGIVAQLPLLSQSLFQDHGKLLQFSGHSALVGIKSPN
LLKIAQSKTTQLEEAFEKIAGQAVRVILQMGHDLDEAHPLAAPVAMNSAPTTLPLRETSG
AIAPPPPPRAMAAPQMPPPLVPEIKSVASPPEISAPVAPITPPTVAPEPLVEADPQESNL
QAIAQQFAEFFAGEVIELTHLVPQEKVQTPIPVPEPSPAAPPSTTTPVVQGRPTKPPAPD
DEIPF
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcctacgaaccgctccaccacaaatatcgcccccagactttcgcgcagttggttggt
caaggggcgatcgccatgaccttgagtaatgcccttgaacagcgacggattgcccctgcc
tatttgttttcagggccgagggggaccggaaaaacctctagcgctcggattctggccaaa
tctctcaattgtttaaattcagccaatccgaccccaaacccctgcggcgaatgtgaagtc
tgtcgggcgatcgccaatggctctgctttagatgtgatcgaaattgatgcggccagtaat
acaggtgtagataatattcgagaattaatcgagcgatcgcagtttgccccggtgcaatgt
cgctacaaagtatatgtgattgacgaatgccatatgctcagcgtagcggcgtttaatgcc
ctattaaaaaccctggaggaaccgcctgcccatgtggtttttgtattagcgacgaccgat
ccccaaagggttttgccgacgattatttcccgttgtcagagattcgactatcgccgcatt
cccctcgacgcgatggtggggcatttgcgaaaaattgcccaactcgaaaatattgagatt
cccctcgaatctgtgactctgattgcccaaattgccaacgggggactgcgagatgcagaa
agcttgcttgatcagttgagcctgctcgctggtgaaattacccccgataaggtgtgggat
ctggtgggtgcggtgccagagcgggacttattggacctgatccaagtcattcgcaacgac
agtccagaggctgtgattcaacaatgtcgcagtttgcttaatcgaggccgagaaccctta
gttgtgctccaaaatttagcgagtttttatcttaatttactaatcgcaaaaacagcgccg
cagcggagtgatctcatggcggtgacccaaccgacttgggtggccctctgtgaggaagct
aatttttggcccacggccaccattttacaggggcaacaacggcttaaggaaagcgaatat
caactcaaaaatacaacccaaccgcgtctctggttagaaattacgctcctgggactattg
cccggtgctttgaaccagaccgaaacccaaggcacagcgatcgccccaccgttgagtcgc
tcaacctcagcggccctccccccaccgtcctcgaaaccagaagcaccatcacatcctttt
gggccggttcccacagccccacatgtagagtctcagccctctccccccccggttgtgtct
ccggcgacagtaccgatccaaagtccccctccacccctgacttctccggggattagtccg
cctccaggggggccattgactcctgagtttattaatggcgatcgcccagtgtcaccaccc
caaaacagtcctccagcgcctccccaacaatcccaaagtgcgcttaataatggggcgatt
gccagtgccgcatcatccactaccacgacagggagcgccatttctagcctcgaacgggag
gaattatggcgcgggatcgtcgcccaattgccactcttgagtcaatctttatttcaagac
catggcaaattgctccaattttctggccatagcgccctggtggggatcaaaagtccgaat
ctcttaaaaatcgcccaaagtaaaacgacgcaactggaagaggcctttgaaaaaattgct
ggtcaggcggttagggtgattctccaaatgggccatgatcttgatgaagcccatcccctt
gcggccccggtggccatgaattcggccccaacaacgctccccttaagagaaacttccggg
gcgatcgcccccccgccaccaccaagggcgatggctgcgccccaaatgccccctcctctt
gtgccagaaatcaaatctgtcgcctcccccccagaaatatcggcaccagtcgcacccata
acaccccccacagttgccccagaacccttagtagaggctgatccccaagaaagtaatctc
caggcgatcgcccaacaatttgccgaattttttgctggggaagtgattgaactcacccat
ttagtcccccaggaaaaagtacaaaccccgatccctgtaccagaaccaagcccagccgct
cccccatcaacgaccacaccggtagttcagggtcgtcccaccaaacccccagccccagac
gatgaaattcctttctag
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