Synechococcus sp. NIES-970: NIES970_20450
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Entry
NIES970_20450 CDS
T09762
Symbol
rnd
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
synn
Synechococcus sp. NIES-970
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synn03016
]
NIES970_20450 (rnd)
Enzymes [BR:
synn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NIES970_20450 (rnd)
Transfer RNA biogenesis [BR:
synn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NIES970_20450 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
ImpA_N
BE_C
Motif
Other DBs
NCBI-ProteinID:
BAW97099
UniProt:
A0A1Q2TZD7
LinkDB
All DBs
Position
complement(2132945..2133568)
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AA seq
207 aa
AA seq
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MDQFALFDQDLSPDILERYLKSQAIAVDTETMGLNPHRDRLCLVQLCDDDGYVSAIRIAR
GQTAAPNLKILMEAPQITKVFHFGRFDIAQLRHTFAIETQPFFCTKIASKLARTYTSSHG
LKALVKELMGIELDKSAQSSDWGNVAALSVEQLKYASNDVRYLIPMMHQLTAMLKREERW
ELMEECLRCLPTFISLDLAFYDNVFEH
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatttgccctcttcgaccaagacctcagtcccgacatcttagaacgctacctc
aaatcccaggcgatcgccgttgataccgaaaccatgggcctcaatccccaccgcgatcgc
ctctgccttgtgcaactttgtgacgacgacggctatgtcagcgcaatccgcattgcccgg
ggtcagaccgctgccccaaacctcaaaatcttgatggaagcgccccaaatcacaaaagtt
ttccactttggtcgctttgatattgcccaactgcgccatacatttgccattgaaacccag
ccttttttctgcacaaaaattgccagcaagcttgcccgcacctacacttcaagccatggt
cttaaggctctggtgaaagaactcatgggcattgaactcgataaatctgcccaaagctct
gactggggtaatgtggcggccctcagcgttgaacaactcaaatacgcatctaatgatgtg
cgctatttgatccccatgatgcaccagctaacggccatgctcaaacgggaagagcgctgg
gagctcatggaagaatgtctccgctgcctccccacgtttattagtctagatctagctttt
tacgacaatgtatttgagcattaa
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