Synechococcus sp. NIES-970: NIES970_22240
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Entry
NIES970_22240 CDS
T09762
Symbol
sigF
Name
(GenBank) SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
synn
Synechococcus sp. NIES-970
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synn03021
]
NIES970_22240 (sigF)
Transcription machinery [BR:
synn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIES970_22240 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
KORA
Sigma70_ECF
HTH_17
DUF134
HTH_23
HTH_24
HTH_28
HTH_3
HTH_38
HTH_Crp_2
MarR_2
Xre-like-HTH
HTH_11
LacI
Motif
Other DBs
NCBI-ProteinID:
BAW97273
UniProt:
A0A1Q2TZU9
LinkDB
All DBs
Position
2315905..2316675
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AA seq
256 aa
AA seq
DB search
MTTKVGDNIKFKTIELFQQYQKSKDIKVRNQIVNLNIGLVRKEAHHWSKQCNEAFDDLMQ
VGSLGLLRAIERFTLERGNAFSSFASPYIRGEIQHYLRDKSATVRIPRRILQLRQQSNAF
IRAFRQVHNRQPSVVEIASHLEISVAEWQAIHLAYQNRDPVSLDVAISADQGENTSLGDL
VPDPGYKSFQLAIEDQIRIQQGLAQLEEHTRKVLEFVFLHDLTQKEAAELLGVSVITVSR
HVKKGISALKKILGSD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaccactaaagtcggtgacaatatcaaatttaagaccatagaacttttccagcaatat
caaaagtcaaaagatattaaggttcgcaatcaaatcgtcaacctcaacattggcctagtc
agaaaggaagcccatcactggtcaaagcaatgtaacgaagcttttgatgatctgatgcaa
gtgggcagcctcggactcctccgggcgatcgaacgcttcaccctagagcgggggaatgcc
tttagttcctttgccagtccctatatccggggagaaattcagcattatctacgcgacaaa
agtgcgactgttcgtatcccccgacggattctccagttgcggcagcagtcaaatgctttt
atccgcgcgttccgccaagtccataatcgccaaccttccgtcgttgaaatcgccagccat
ctcgaaatttctgttgcagagtggcaagcgatccatctggcttaccaaaaccgtgaccca
gtgagcctagatgtggcgatctctgccgatcagggtgagaacaccagcttaggggatctc
gtccccgaccctggctacaaaagcttccagttagctatcgaagaccaaattcgcatccaa
cagggccttgcacagctagaagaacatactcgtaaggtgctggaatttgtttttctccac
gatttgacccagaaagaagcggcagagcttctcggggtgagtgttattaccgtttctcgc
catgtaaaaaaaggcattagcgccctcaaaaagattcttgggagcgattaa
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