Synechococcus sp. NIES-970: NIES970_23530
Help
Entry
NIES970_23530 CDS
T09762
Symbol
cpcF
Name
(GenBank) phycocyanin alpha subunit phycocyanobilin lyase, CpcF
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn00196
Photosynthesis - antenna proteins
synn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
NIES970_23530 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
synn00194
]
NIES970_23530 (cpcF)
Enzymes [BR:
synn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
NIES970_23530 (cpcF)
Photosynthesis proteins [BR:
synn00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
NIES970_23530 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
TAF6_C
TOR1L1_N
ISAV_HA
Motif
Other DBs
NCBI-ProteinID:
BAW97402
UniProt:
A0A1Q2U0C4
LinkDB
All DBs
Position
2450908..2451525
Genome browser
AA seq
205 aa
AA seq
DB search
MTVEVLIRAVNNPTSAQDLVKNVAQLAATQDLQAIPTLVEVLKFNNPGAAVAAVNGLIQI
GEPVIPYLLDNIDGYNYGARAWMLRVFAGIGDPRALDLLIEAANKDFAFSVRRSAAKGLG
GIQWQQVPDAEKETQQQKVLDCLLLALEDGEWVVRYGAIAGLEGLAPSVSPGLQSTIKAK
LVEFMATESEAAIRVRTKKALLNLP
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgaagttctcatccgcgccgttaacaaccctacctctgcccaagatttagtt
aaaaatgtcgcccaacttgccgctacccaagacctccaggccatccccaccttagtggaa
gtgctaaagtttaataatccgggggctgccgttgctgccgtcaatggcttaattcaaatc
ggcgaacccgtcatcccctacctcctagacaatatcgatggctataactacggagcgcgg
gcttggatgctacgggtgtttgcagggattggtgatccacgggctctggatttactgatc
gaagcggcgaataaagattttgcctttagtgtgcgtcgttccgcagcaaagggcttaggg
ggaattcaatggcagcaagttcctgatgcagaaaaagaaacccagcaacaaaaagtttta
gattgcctattgctcgccctcgaagatggggaatgggtggtacgctacggggcgatcgcc
ggattagaaggcttagctccttctgtttcccccgggttacaaagcactatcaaggcaaaa
ttagtcgaatttatggccactgaatctgaagcggcgatccgagtgaggacaaaaaaggcg
ctgctgaacctgccatag
DBGET
integrated database retrieval system
