Synechococcus sp. NIES-970: NIES970_25330
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Entry
NIES970_25330 CDS
T09762
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn02024
Quorum sensing
synn03060
Protein export
synn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NIES970_25330 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NIES970_25330 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES970_25330 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
synn02044
]
NIES970_25330 (ffh)
Enzymes [BR:
synn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NIES970_25330 (ffh)
Secretion system [BR:
synn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NIES970_25330 (ffh)
Eukaryotic Sec-SRP protein
NIES970_25330 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
ArsA_ATPase
nSTAND3
6PF2K
AAA_33
AAA_16
PIF1
cobW
ATPase
APS_kinase
AAA_24
SopD
RNase_J_b_CASP
ResIII
AAA_31
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAW97579
UniProt:
A0A1Q2U0R1
LinkDB
All DBs
Position
2638696..2640132
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AA seq
478 aa
AA seq
DB search
MFDALAERLEDAWKALRGQDKISESNIKDALKEVRRALLEADVNVQVVKGFITEVEKAAI
GAEVVSGVNPGQQFIKIVYDELVKIMGESNVPLAEAPNKPTVILMAGLQGTGKTTATAKL
SLYLRKQNKTALMVATDVYRPAAIDQLKTLGEQIQVPVFDLGSDANPVEIARQGIEKGKE
LGVDVVLVDTAGRLQIDADMMAELKQIKETIQPDDTLLVVDSMTGQEAASLTRTFHEEIG
VTGAILTKMDGDTRGGAALSVRMISGQPIKFIGVGEKVEALEPFYPDRLASRILNMGDIL
TLVEKAQEAVDLSDVEEMQAKLLEARFDFDDFLKQMRLLKNMGSLGGMLKLIPGIGNKID
KNMLEQGEVQLKRVETMINSMTKEERKNPDLLAQTPKRRSRIAKGSGLSEKDVSKLIADF
TRMRKMMQQMGQGGGLPGMGGLGDMFGGGMPGMGGPGRGGAMPKKQKKVKKKKGFADL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgccctagccgaacgccttgaagatgcctggaaagccctccggggtcaggac
aaaatcagcgaatcgaacatcaaagacgccctcaaggaagtccgtcgcgccctgttagag
gcggatgtgaatgtgcaagtggtcaaaggctttatcaccgaggtcgaaaaagcggcgatc
ggcgctgaggtggtttctggggtaaaccccggccagcagttcatcaaaattgtctacgac
gaactcgtgaaaatcatgggggaaagcaatgttcccctcgccgaagctccaaacaagcca
actgttatcctcatggccgggcttcaggggactgggaaaaccaccgccactgctaagctt
tctctctatctgcgcaaacaaaataaaaccgccctgatggtggcgaccgacgtctaccgc
ccggcggcgatcgaccagctcaaaaccctcggggagcagattcaagttccggtttttgac
cttggtagcgatgccaatcctgtcgaaatcgcccgccaggggatcgaaaaaggaaaagaa
ctgggcgttgatgttgtccttgtagatacggctggccgcctgcagatcgatgccgacatg
atggccgagctcaagcagatcaaagaaaccattcagcccgacgataccctgctcgtggtc
gactccatgacgggccaagaagctgccagcttaacccgtactttccacgaagaaatcggc
gtcaccggggcaatcctcaccaaaatggatggcgatacccggggtggtgctgcgctgtcg
gtgcggatgatttccggtcaaccgattaaatttatcggggtcggcgaaaaagtcgaagcc
ctcgagccgttctatcccgatcgcctcgcctcgcgcattttgaacatgggggacattctg
accctcgtagaaaaagctcaggaagcggtagatctctccgatgtggaggagatgcaggca
aaattattagaagcgcggtttgatttcgatgacttcctcaaacagatgcgcctgctgaaa
aatatgggctccctcggcgggatgctcaagctgatccccggcattggcaacaagattgat
aaaaatatgctggaacagggggaggtgcaactcaagcgggtggagacaatgatcaactcc
atgaccaaagaagagcgcaaaaacccagatctgttggcccaaaccccgaaacgccgtagc
cgcattgccaaaggttctggcctctctgaaaaagatgtgtctaaattgattgccgacttc
acccggatgcggaaaatgatgcaacagatgggccaagggggaggtttacctggtatggga
ggcctcggcgatatgtttggtgggggcatgcccggcatgggtggccctggtcgcggtggg
gcgatgccgaaaaaacaaaagaaagtgaagaagaaaaaaggttttgcagacctctaa
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