Synechococcus sp. NIES-970: NIES970_27410
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Entry
NIES970_27410 CDS
T09762
Name
(GenBank) ABC-type multidrug/protein/lipid transport system, ATPase component
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
synn
Synechococcus sp. NIES-970
Pathway
synn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
synn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES970_27410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synn02000
]
NIES970_27410
Enzymes [BR:
synn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NIES970_27410
Transporters [BR:
synn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES970_27410
BRITE hierarchy
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
nSTAND3
RsgA_GTPase
AAA_25
AAA_29
AAA_5
AAA_30
Zeta_toxin
AAA
nSTAND1
DEAD
Lactamase_B_5
Motif
Other DBs
NCBI-ProteinID:
BAW97780
UniProt:
A0A1Q2U1J5
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All DBs
Position
plasmid1:14352..16223
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AA seq
623 aa
AA seq
DB search
MANSARGHWQQSLKSFVKTHVQNPAYRVVLGTINYNRGLIALNFNANLLSAVFEGSSFGL
IFLALQAIASPDATAQVFNNSFLANTGFSAFVAQLSQGQLFVGLIVLAITLQYLRNALEY
AGAVSSDYLSARIQALMTEKIFRQVMSFSFACASRYKVGDLTSYITLAAPTVNREIFYWN
RLFLNVMTAIAQLVVLLVISPLLFLVTLLVSAGLFWFQKFLLPRIRQTALSVTQFQVGVS
KHITESIQGLRVLHTFASQGRSIQTLQALQRDLVPQLEKQSRLIQLATPLGRSLTLTSIG
LILLAGYSILQSRSTELLPVLVTFLAVLNRLTLYLNSITACLGVLAQNAGDFQRLEEILQ
TEDKEFIQSGTVIFKTLKDRIEFRGVSLKYPQTERWALRDVSFALPRGKVVALVGESGAG
KSSIADLLIGLYQATQGNIYVDGTSLEEYDLQSWRSQLGVVSQDTFVFNDSILENIRYGK
PNATDEEVTQAAIAAQADQFICDLPEAYQTVVGERGYRLSGGQRQRLALARAILKQPQVL
ILDEATSALDSKSEQLVQEALGQFQESCSILVIAHRLSTITDADEILVLEQGAIVQQGNH
HNLLSQPGKYKDYWLRQSTATSS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcagcccgagggcattggcagcaatctctaaaatcttttgtcaaaacacac
gttcagaatcctgcttatcgggtcgtactggggacaattaactacaatcgcggcttgatt
gccctaaactttaatgccaacttactctcagcggtgtttgaagggagtagttttggttta
atttttttggcgctccaggcgatcgcctcccccgatgccacagcccaggtatttaacaat
agctttctggcgaatacaggatttagtgcctttgtcgctcaactgagccaagggcagcta
tttgtagggctcattgtcttggcgatcaccctccaatatctgcgcaatgccttggaatat
gccggtgcagtatcctctgattatctgtcggcgcggatccaagccctgatgaccgagaaa
atttttcggcaagtgatgtcctttagttttgcctgtgccagtcgttataaagtaggcgat
ctcaccagttacattacccttgccgcccccacagtcaatagagagattttttattggaac
cgtttgttcctgaatgtaatgacggcgatcgctcagctagtcgtgctattggtgatctcc
cccctcctctttttggtgacgctgctggtttctgccgggctattttggtttcaaaaattt
ctcttaccccgcattcgtcagacagccctctcggtgacccaatttcaggtgggggtttct
aaacatatcaccgagagtattcaaggattacgggtgctccatacctttgcgagccaaggc
cgctccattcaaactctccaagcactccaacgggatctcgtcccccaactcgaaaaacaa
agtcgtttaattcagttggcaacccccctaggacgttctctaaccctcactagtattggt
ctcattttgttagcgggttattcgattctccaaagtcgttctacagaattgctccctgtc
ttggtgacttttctcgccgtgctcaatcgtttaacgctttatctcaatagcattactgcc
tgtctcggtgtccttgcccaaaatgcaggtgattttcaacgcctagaagaaattctgcag
actgaggataaagaatttatccagtctggtacagtcatttttaaaaccctcaaggatcgg
attgagtttcgcggagtctctctcaaatatcctcagacggagcgctgggctttgcgggat
gtctcgtttgctttaccgaggggtaaggttgtggccttggttggtgaatcaggtgcagga
aaatcttccattgcggatctgctgattgggttatatcaagcaactcaaggcaatatatat
gtcgatggtacttccttggaggagtatgatttgcagagttggcgatcacagttgggggtc
gtcagtcaagatacttttgtatttaacgatagcattctagaaaatatccgctacggtaaa
cccaatgcaacggatgaagaggtaacccaagcggcgatcgccgcccaagccgatcaattt
atctgcgatttaccagaagcttatcagacagttgttggggaacgaggctatcgactttcc
ggtggtcaacggcaacggttggccttagcccgtgccatcctcaaacaaccccaagtccta
attctcgatgaagcgaccagtgctttagatagtaagtcagagcagttagtccaggaagcc
ctagggcagtttcaagaatcctgtagcattctcgttattgcccaccgcctttcgaccatc
acagatgccgatgaaattcttgtcctagagcagggagcaatagtacaacagggcaaccat
cataatctactcagtcaaccagggaaatacaaagactactggctacgtcaatctacagca
acttcgagctaa
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