KEGG   Synechococcus sp. NB0720_010: LY254_00940
Entry
LY254_00940       CDS       T10498                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
syno  Synechococcus sp. NB0720_010
Pathway
syno03030  DNA replication
syno03430  Mismatch repair
syno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:syno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LY254_00940
   03430 Mismatch repair
    LY254_00940
   03440 Homologous recombination
    LY254_00940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:syno03032]
    LY254_00940
   03400 DNA repair and recombination proteins [BR:syno03400]
    LY254_00940
Enzymes [BR:syno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LY254_00940
DNA replication proteins [BR:syno03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LY254_00940
DNA repair and recombination proteins [BR:syno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LY254_00940
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: UPH90311
LinkDB
Position
178412..179320
AA seq 302 aa
MTRGDAEMDEQQPRAGWEQVDLLSLVSGSAAAPVVPEPAPEPAAETAVVADRAEAPEPSP
AARLSGPSGPELLLILDTETTGLSPAEHRCIEVGAVLFSVPDRSVLSQVSFLMPCTSNAA
EAVNGIAPALTQRPQPWQAGLACFEAMVEAADVLLAHNAAFDQQWFGLGSLPALSKPWLC
SMEDIRWPQERQLRSTPSVRDLALAYGVPVWAAHRALTDCIYLAQVFERCEDLEDLLLQA
MEPRRLYRARLSYEERHKAREAGFRWNQPVSGAWSRRLSEREVALLPFPVVPVDEAAELR
SA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaccaggggcgacgcggagatggacgaacaacagccccgtgctggctgggagcaggtg
gatctgctcagcctggtcagtggatctgccgcggcgccagtcgtgcctgagcctgcgccg
gagccggctgcggagacggctgttgttgctgaccgggctgaggcacctgagccatcgcct
gccgcgcgtctctctggtcccagtggccccgagctgctgttgatcctcgacacggagacc
accggcctctccccggcggagcatcgctgcattgaggtcggtgcggttcttttttcggtg
ccggatcgctcggtgttgagccaggtttcgtttttgatgccttgcaccagcaatgccgct
gaagcggtgaatggcatcgccccggccctgacgcaacgccctcagccatggcaggcgggt
ctggcctgcttcgaggccatggttgaagccgctgacgtcctcctggcccataacgccgcc
ttcgatcagcagtggtttggtctgggctccctgccggcactcagcaagccctggctttgc
tccatggaggacattcgctggccccaggagcgtcagctgcgctctacgccctcggtacgt
gatctggccttggcctatggcgtaccggtttgggcggcccatcgggccctcaccgattgc
atctacctggcgcaggtctttgagcgttgcgaggacttggaggacctccttctccaggcg
atggagccgcgccgcctctaccgcgctcgtctctcctatgaagaacgccacaaggcccga
gaggcgggcttccgctggaatcaaccggtgagcggagcctggagccggcgcctgtctgaa
cgggaggtggccctattgcccttccctgtcgttccggtcgatgaggctgcggaattgcgc
agcgcctga

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