Synechococcus sp. NB0720_010: LY254_01670
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Entry
LY254_01670 CDS
T10498
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
syno Synechococcus sp. NB0720_010
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syno03016
]
LY254_01670
Enzymes [BR:
syno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LY254_01670
Transfer RNA biogenesis [BR:
syno03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LY254_01670
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
UPH90445
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Position
complement(306428..308221)
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AA seq
597 aa
AA seq
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MAAAKPRPSAWGAAWLLLKDSGEAVSLQEFCDLLYGNTEPLQLSACWLALVGGQQWFRWK
QGHVQARTLDELKPLRRERRLKAIAEEEERRWLQLLKRRQPTTADQCSALHLQWLELLKE
TASGRRELSELPDGLRQSLSLLHLTQERSQLRHLLVDLGQWDPHQLLSLAGTVWSEGFSE
SLVLEAQRLEVEAEQAQPSDPTRVDLCQQRCVTIDDDDTRDIDDGLAIEKTAAGRTRIWI
HVADPGRLIPAGSPLDLEARKRASSLYLAQGNVPMFPDKLSTGVFSLRAGRRTAAWSTWA
ELNEDGSLSDYGMVRSWVKPIYRLSYDDADELIELAPPQDSDLADLEALLNARRRWRLSQ
GALQMDLPEGRIRAREGLAQLEVTEPSNSRQMVAEAMILAGAVAAQLGQDRGIALPYRSQ
LPAELPGQAELDALPDGAVRFAAIKRCLSRGLMGTKPAAHFSLGLPAYVQATSPIRRYGD
LLVQRQLAAKEPLSEDALQELVNAVDAAIREGIAISREDQRHWQQVWFEGQKGQQWRAQF
LRWLRPQDNLGLVRIDELAMDLAAECPSHATPGDALLLRIQSVDSLQDQLRLVASAS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcggccaaaccacgcccctccgcttggggggccgcatggctcctgctgaaggac
tccggcgaagccgtgagcttgcaggagttttgcgatctgctctatggcaacactgaaccg
ctccagttgagtgcctgttggctggccctagtgggtggtcagcagtggttccgttggaaa
caaggccatgttcaggcccgcaccctggatgagctgaagccactgcgtcgcgaacgacgt
ctcaaggcgattgcagaagaggaagaacggcgctggcttcaactgctgaagaggcgccaa
ccaacaacagcagatcagtgcagcgccctgcatctgcagtggctcgagctgctgaaggag
acggccagtggacgccgtgagttgtctgagctcccggatgggttgcgtcagagcctgtcg
ctgctgcatctgacgcaagagcgctcccaactgcgtcatctattggtggacttgggtcaa
tgggacccccaccagctcctctccctggccgggacggtctggagtgaagggttttcagag
tcgcttgtcctggaagcgcaacgactagaggtagaggctgagcaggcgcagccaagcgac
ccgactcgggtcgacctctgccagcaacgctgcgtgacgatcgacgatgacgacacccgc
gacatcgatgacggtctggcaatcgagaaaactgccgctggccggacaaggatctggatc
catgtggccgatccagggcgattgattccagctggctcgcccctcgacctagaggcgcgc
aagcgggccagcagcctgtacctggcccagggcaatgtgccgatgtttcccgataagctc
tccaccggggtcttcagcctgcgggccggacgccgcacggcggcctggagcacctgggcc
gagctgaacgaggacggatccctgtcggactacggcatggtgcgcagctgggtcaagccg
atctatcgactcagttatgacgatgccgatgagctgatcgaactggccccaccgcaggac
agcgatcttgctgatctggaagccctgctgaatgccaggcggcgctggcgactctcacaa
ggggcactgcaaatggatctgcctgaaggccggattcgagcccgggagggactggcccag
ctcgaggtcaccgaaccgagcaactcgcgccagatggtggccgaagcgatgatccttgcc
ggtgccgtcgctgctcagctcggacaggacaggggaatcgcccttccttatcgcagtcag
ctgcctgctgaactcccaggacaagcggaattggacgcccttccagacggagccgttcgc
ttcgcagcgatcaagcgctgcttgagtcgcggcttgatgggcaccaagccagcggcccat
ttcagcctcgggcttccggcctatgtgcaggccacgtcaccgatccggcgctatggcgat
ctgctcgttcagcgccagttggccgcgaaggagccgctctcggaagacgccctgcaggag
ttggtgaacgcggtcgatgccgccatccgcgagggaatcgctatttcccgagaagaccag
cggcattggcagcaggtttggtttgaaggacagaagggccagcagtggcgagctcagttt
ctgcgctggctacggccacaggacaatcttggcctggttcgcatcgatgagctggcgatg
gatctggctgcggaatgcccaagccacgcaaccccgggggacgccttgctgctgcgcatc
caatcggtcgactctcttcaggatcagctgagactcgtggcgtcggccagttaa
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