Synechococcus sp. NB0720_010: LY254_02730
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Entry
LY254_02730 CDS
T10498
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno03410
Base excision repair
syno03430
Mismatch repair
syno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LY254_02730 (recJ)
03430 Mismatch repair
LY254_02730 (recJ)
03440 Homologous recombination
LY254_02730 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syno03400
]
LY254_02730 (recJ)
DNA repair and recombination proteins [BR:
syno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LY254_02730 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LY254_02730 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LY254_02730 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UPH90634
LinkDB
All DBs
Position
496546..498486
Genome browser
AA seq
646 aa
AA seq
DB search
MLLESPEQRLFDQRLQQNWQLPAAVALEELPGDVQALGLSEPILALLSRRGFGSAAAIEA
LLNPADAPDPKHHFPDLGLAVKRLKQACKTNERLAICGDYDADGMTSTALLIGVLQQLGA
QPQAAIPSRQSDGYGLNVSMVEELAAEGIRLLVTVDNGVSAREALERAQALGLEVIVTDH
HTIPEERPPLSALLHPQCTPEDSPYRGLAGVGMAYVLAGALAKANRSAKALAMALDLFCI
GTIADMAPLQGVNRRWLMDGLPRLKDSPLPGLQALQQVAGLDDVPIDAGAVGFQLAPRIN
AVGRLGDPRLVVDLLTTDDPEQALELARECESLNRQRRELCDAIEAEARALAEADGDQRS
PFLLLAQSHWHHGVIGIVAARLVEHYGAPVALLAAEGDGRMRASVRAPKGFAVDAALQAC
GDLLERFGGHPAAGGFTVKAERVTALHERLNDLAQVWREREGLQLVMPEALLKLEQINRP
LWRELQRLEPFGIGNPTPLFWSCGCTISQQRELRGGHLQLSLRQGEARVRAMAWRWGAVG
HLLPKQVDVAYHLRLNRWNGEESLQLEVVGIRPSSGEALVLQRQERSYWVRREGNVVVIR
NADGEELRGEAQQGRLEALQIDHPKAEHPYVKALVQDAARAMGLAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctcgagtctccagagcaacgcttgttcgaccagcgcctacagcagaactggcag
cttcccgctgcggtggccctcgaggagctccccggcgacgtgcaggccctgggactctca
gagcccatccttgccctgctcagccgacgcggctttggcagtgctgccgcgatcgaagca
ctgctgaaccccgcggatgcccccgatcccaagcaccacttccccgacttaggcctggcg
gtcaagcgcctgaagcaggcctgcaaaaccaacgaacgcctggcgatctgcggcgactac
gacgccgatggcatgaccagcacggcgctcctgatcggtgtcctgcagcagttaggggcg
caaccgcaagcggccatccccagccgccagtccgatggctatgggctgaatgtctcgatg
gtggaggagctggccgctgagggcattcgactgctggtcaccgtggacaacggggtctcc
gcacgggaagcactcgagcgcgcccaggcgctcggcctcgaggtcatcgtcaccgaccac
cacaccattcccgaggagcggccgcccctcagcgccctactgcacccgcagtgcaccccg
gaggactccccctaccggggcttggccggggtgggcatggcctacgtcctcgccggcgcc
ctggccaaggccaaccgctcagccaaggctctggccatggccctggacctcttctgcatc
ggcaccatcgccgacatggctccgctgcagggggtcaatcgccgctggttgatggacggc
ttgccacggctcaaggacagtccgctgccggggctccaggccctgcagcaggtggccggt
ctcgacgatgtgccgatcgacgccggtgccgttggcttccaactcgccccccggatcaac
gccgtcggacggctgggggatccgcgcttggtggtggatctgctgaccaccgatgacccg
gagcaggccctggaactggcccgggaatgcgagagcttgaaccgccaacgccgggagctc
tgtgatgccatcgaggcggaggcacgggccctggctgaagcggatggagaccagcgcagt
ccattcctactgctggcccaaagccattggcatcacggcgtaattggcatcgtggcggcc
cgtttggtcgagcactacggcgcccccgtcgccctgctggccgccgagggggatggccgg
atgcgggcctcggtgcgggcgcccaagggctttgccgtcgatgccgccctccaggcctgc
ggtgatctgctggagcggtttggtggccaccccgccgccgggggcttcaccgtcaaggcc
gagcgggtcacggccctgcatgaacggctcaacgacctggcgcaggtctggcgcgagcgg
gagggcctgcagctggtcatgcccgaggccctgctgaagctggagcagatcaaccggccc
ctctggcgagagctgcaacggctggagcccttcggcattggcaatcccaccccactcttc
tggagctgtggctgcacgatcagccaacagcgggagctgcggggtggtcaccttcagctc
agcctgcgccagggcgaagcgcgggtgcgggccatggcctggcgctggggagcggttggc
catctgctgccgaagcaggtggatgtggcctatcacctcaggctcaaccgttggaacggc
gaagagagccttcaactcgaggtggtgggcatccgccccagcagcggagaagcgctggtg
ctccaacgccaggagcgcagttactgggtgcggcgggagggcaacgtcgtggtgatccgc
aacgccgatggggaggaactccggggcgaagcccagcagggccggctggaagcccttcag
atcgatcacccgaaggcggaacacccctatgtgaaagccctggttcaagacgcagccagg
gcgatgggactggcggcctag
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