Synechococcus sp. NB0720_010: LY254_02890
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Entry
LY254_02890 CDS
T10498
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
syno Synechococcus sp. NB0720_010
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syno03021
]
LY254_02890
Transcription machinery [BR:
syno03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LY254_02890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_AsnC-type
Sigma70_r4_2
Sigma70_r4
DUF6362
Motif
Other DBs
NCBI-ProteinID:
UPH90664
LinkDB
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Position
527827..528588
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AA seq
253 aa
AA seq
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MAVQDQQQWLLSRYLKDPNHAHRNAVVAANLPLVWKVARRESERSGHSFEDLAQEGARGL
IKAVERFDPSLGNTLSTAAVPWIRGAMRHYLRDRCRVFSGARSVIELLQRGAALQRRRGQ
QGLSPMNDSALARALGCSQQRWQEAQALQTCLRVASLDHPGGGSDPETPLVEQLSDQQAP
GQYGWLERCELRRQLWRGLKTLQASQRRLVLARVLQQRTWQDLGAMAGISARAAQRRYQQ
ACGIVRQQLVGAS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcagtccaggaccaacagcaatggctcttgagccgttatctcaaggaccccaaccac
gcgcaccgcaacgccgtcgtcgccgccaacctgcccctggtctggaaggtggcccggcgg
gaaagcgaacgcagcggccacagctttgaagacctggcccaagagggcgcacgcggtctg
atcaaggcggtcgagcgctttgatccaagcctgggcaacaccctgagtacggccgccgtt
ccctggattcgcggcgccatgcgtcactacctcagggaccgctgccgcgtcttcagcggc
gcccgcagcgtgatcgagctgctgcagcggggagcagcactgcagcgccggcgcgggcag
cagggactcagcccgatgaacgacagcgccctggcccgggccctcggctgctcccagcag
cgctggcaggaagcccaggctctacaaacctgcctgcgggtggcgagcctggatcatccc
ggcggcgggtcagaccccgagacccccctggtggagcaactcagcgatcaacaggcacca
ggccagtacggctggctcgagcgctgcgaactgcgccgtcagctctggaggggactgaaa
accctgcaggccagtcaacggcgactggtgctagcccgggtactgcagcagcggacctgg
caggacctgggtgccatggcagggattagtgcccgtgccgcccagcggcgctaccagcag
gcctgcggcatcgtccgtcagcaactggtgggcgcgagctag
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