Synechococcus sp. NB0720_010: LY254_05440
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Entry
LY254_05440 CDS
T10498
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LY254_05440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syno03019
]
LY254_05440
03016 Transfer RNA biogenesis [BR:
syno03016
]
LY254_05440
Enzymes [BR:
syno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LY254_05440
Messenger RNA biogenesis [BR:
syno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LY254_05440
Transfer RNA biogenesis [BR:
syno03016
]
Prokaryotic type
tRNA degradation factors
LY254_05440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
PCB_OB
OB_RRP5_4th
KH_PNO1_2nd
KH_KhpA-B
DUF3586
KH_2
Motif
Other DBs
NCBI-ProteinID:
UPH91118
LinkDB
All DBs
Position
1034967..1037099
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AA seq
710 aa
AA seq
DB search
MQGHTQSVSFDGREIRLTTGRFAPQAGGSVMVECGDTSVLVTATRSGGREGIDFLPLICD
YEERLYAAGRIPGSFMRRESRPPERATLIARLIDRPMRPLFPSWLRDDLQVVATCMSLDE
RVPPDVLAVTGASLATLLAKIPFNGPMAAVRVGLLGDDFILNPSYREIERSELDLVVAGT
PQGVIMVEAGANQLPEQDVIEAIDFGYEAVCELIKVQQTLLKELGIEQVIPEAQSVDATL
PTFLEKECSKGIGDVLKQFSLTKAERDEQLDAIKAQAAEKISGLKDDDAVKVAVSSNGKA
LGNNYKALTKKLMRAQIVNDGKRVDGRNLDEVRPISAAAGVLPKRVHGSGLFQRGMTQVL
SCATLGTPSDAQEMDDLNPSNEKTYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERAL
IPVLPSKESFPYVLRVVSECLSSNGSTSMGSVCGSTLALMDAGVPLKAPVSGAAMGLIKE
GSEVRILTDIQGIEDFLGDMDFKVAGTEKGITALQMDMKITGLEVKTVAEAINQARPARL
HILEKMLAAIDKPRDVLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
GGIVTIASHDGAAAEEAQRIIEGLTRRVSEGEVFSGAVTRVIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVKVGDHVTVRVREIDNRGRINLTLRGVPQQDEPAQA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggtcacactcagtcggtctccttcgatggtcgggagatccgactgaccacaggt
cggttcgccccgcaggccgggggttccgtcatggtcgaatgcggagatacctctgttctc
gtcactgccacccgctccggcggccgtgagggcatcgattttctgccgctgatttgcgat
tacgaggagcgtctctacgccgctggtcgtatccccggcagcttcatgcgccgcgagagc
cgtccccccgagcgcgccaccctgatcgcgcgtctcattgaccgcccgatgcgcccgctg
ttccccagctggctgcgggatgacctgcaggtcgtcgccacctgcatgtccctggatgag
cgggttccgcccgatgtcctggcggtgaccggcgcctccctggccaccctgctggccaag
atccccttcaacggcccgatggcggctgtgcgggtcggcctgctgggcgatgacttcatc
ctgaaccccagctaccgcgagatcgagcgctctgagctggatctggtggtcgccggcacc
ccccagggcgtgatcatggtcgaggcgggcgccaaccagctgcccgagcaggacgtgatc
gaggcgatcgacttcggctacgaggccgtctgcgaactgatcaaggtccagcagaccctg
ctcaaggagctcggcatcgagcaggtcatccccgaggcccagagcgtcgacgccaccctg
cccaccttcctggagaaggaatgcagcaagggcatcggcgatgtcctcaagcagttcagc
ctgaccaaggccgagcgcgacgagcagctcgacgcgatcaaggcccaggcggccgagaag
atcagcggcctcaaggacgacgacgccgtgaaggtggccgtcagcagcaacggcaaggcc
ctgggcaacaactacaaggcgctcaccaagaagctgatgcgcgcccagatcgtcaacgac
ggcaagcgcgtcgacggccgcaacctcgatgaggtgcgtccgatcagcgccgccgccggt
gtactgcccaagcgcgtgcacggctccggtctgttccagcgcggcatgacccaggtgctc
tcctgcgccaccctcggcaccccgagcgacgcccaggagatggatgacctgaacccgtcc
aacgagaagacctacctccaccactacaacttccccccctattccgtcggcgagacccgc
ccgatgcgcagccccggccgccgcgaaatcggccacggcgccctggcggagcgggccctg
atccccgtcctccccagcaaggagagtttcccctacgtgcttcgcgtggtgtcggaatgc
ctgagctccaacggctccacctccatgggttcggtctgcggcagcaccctggccctgatg
gatgccggcgtgcccctgaaggcccccgtgagcggtgccgccatgggcctgatcaaggag
ggctctgaggtccggatcctcaccgacatccaaggcatcgaggacttcctcggcgacatg
gacttcaaggtggccggcaccgagaagggcatcaccgccctgcagatggacatgaagatc
accggcctggaggtgaagaccgtggctgaggcgatcaaccaggcccgtccggcccgtctg
cacatcctcgagaagatgctcgcggcgatcgacaagccccgcgatgtcctgagcccccac
gcccctcgcctgctcagcttccggatcgaccccgagctgatcggcaccgtgatcggcccc
ggcggccgcacgatcaagggcatcaccgagcgcaccaacaccaagatcgacatcgaggac
ggcggcatcgtcacgatcgccagccacgacggtgcagccgctgaggaagcgcagcgcatc
atcgagggcctcacccgtcgcgtctctgaaggcgaggtcttcagcggtgccgtcacccgc
gtgatcccgatcggcgccttcgtcgagatccttcctggcaaggagggcatgatccacatc
tcccaactcagcgaagcccgcgttgagaaggtcgaagacgtggtgaaggtgggtgaccac
gtcaccgtccgcgtccgcgagatcgacaaccgcggccggatcaacctcaccctgcgcggg
gttccccagcaggacgagcccgcccaggcctga
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